Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sf3b6P59708 Gm37444-201ENSMUST00000193605 439 ntBASIC13.02□□□□□ -0.33
Sf3b6P59708 Gm43347-201ENSMUST00000200226 580 ntBASIC13.02□□□□□ -0.33
Sf3b6P59708 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sf3b6P59708 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sf3b6P59708 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Sf3b6P59708 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sf3b6P59708 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Sf3b6P59708 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Sf3b6P59708 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.33
Sf3b6P59708 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sf3b6P59708 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC13.02□□□□□ -0.33
Sf3b6P59708 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sf3b6P59708 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Sf3b6P59708 CT025610.1-201ENSMUST00000224552 1786 ntBASIC13.02□□□□□ -0.33
Sf3b6P59708 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sf3b6P59708 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sf3b6P59708 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Sf3b6P59708 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sf3b6P59708 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Sf3b6P59708 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sf3b6P59708 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sf3b6P59708 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sf3b6P59708 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sf3b6P59708 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sf3b6P59708 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC13.01□□□□□ -0.33
Sf3b6P59708 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sf3b6P59708 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC13.01□□□□□ -0.33
Sf3b6P59708 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sf3b6P59708 Trav13-3-201ENSMUST00000117226 336 ntBASIC13.01□□□□□ -0.33
Sf3b6P59708 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sf3b6P59708 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sf3b6P59708 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Sf3b6P59708 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Sf3b6P59708 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sf3b6P59708 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sf3b6P59708 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Sf3b6P59708 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sf3b6P59708 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sf3b6P59708 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sf3b6P59708 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sf3b6P59708 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sf3b6P59708 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC13.01□□□□□ -0.33
Sf3b6P59708 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sf3b6P59708 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sf3b6P59708 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC13.01□□□□□ -0.33
Sf3b6P59708 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sf3b6P59708 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sf3b6P59708 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sf3b6P59708 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Sf3b6P59708 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Sf3b6P59708 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Sf3b6P59708 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sf3b6P59708 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sf3b6P59708 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sf3b6P59708 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Sf3b6P59708 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Sf3b6P59708 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sf3b6P59708 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sf3b6P59708 Gm5184-201ENSMUST00000220417 1702 ntBASIC13□□□□□ -0.33
Sf3b6P59708 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sf3b6P59708 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Sf3b6P59708 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Sf3b6P59708 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
Sf3b6P59708 Gm13323-201ENSMUST00000120245 1151 ntBASIC13□□□□□ -0.33
Sf3b6P59708 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sf3b6P59708 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC13□□□□□ -0.33
Sf3b6P59708 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC13□□□□□ -0.33
Sf3b6P59708 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC13□□□□□ -0.33
Sf3b6P59708 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC13□□□□□ -0.33
Sf3b6P59708 AC155729.1-201ENSMUST00000227758 544 ntBASIC13□□□□□ -0.33
Sf3b6P59708 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Sf3b6P59708 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Sf3b6P59708 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sf3b6P59708 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC13□□□□□ -0.33
Sf3b6P59708 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sf3b6P59708 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sf3b6P59708 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC12.99□□□□□ -0.33
Sf3b6P59708 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sf3b6P59708 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sf3b6P59708 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sf3b6P59708 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
Sf3b6P59708 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sf3b6P59708 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sf3b6P59708 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sf3b6P59708 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Sf3b6P59708 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC12.99□□□□□ -0.33
Sf3b6P59708 Gm14091-201ENSMUST00000133534 874 ntTSL 2 BASIC12.99□□□□□ -0.33
Sf3b6P59708 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC12.99□□□□□ -0.33
Sf3b6P59708 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC12.99□□□□□ -0.33
Sf3b6P59708 Gm27459-201ENSMUST00000184860 107 ntBASIC12.99□□□□□ -0.33
Sf3b6P59708 Gm34391-201ENSMUST00000203706 907 ntBASIC12.99□□□□□ -0.33
Sf3b6P59708 Cmtm5-203ENSMUST00000227441 610 ntBASIC12.99□□□□□ -0.33
Sf3b6P59708 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Sf3b6P59708 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Sf3b6P59708 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC12.99□□□□□ -0.33
Sf3b6P59708 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sf3b6P59708 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Sf3b6P59708 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sf3b6P59708 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms