Protein–RNA interactions for Protein: P51448

Rora, Nuclear receptor ROR-alpha, mousemouse

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RoraP51448 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC13.89□□□□□ -0.19
RoraP51448 Gm9824-201ENSMUST00000178707 561 ntBASIC13.89□□□□□ -0.19
RoraP51448 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RoraP51448 Gm30437-201ENSMUST00000206086 1201 ntBASIC13.89□□□□□ -0.19
RoraP51448 Gm20949-201ENSMUST00000206478 952 ntBASIC13.89□□□□□ -0.19
RoraP51448 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RoraP51448 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RoraP51448 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC13.89□□□□□ -0.19
RoraP51448 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RoraP51448 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
RoraP51448 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RoraP51448 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RoraP51448 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
RoraP51448 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RoraP51448 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
RoraP51448 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
RoraP51448 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
RoraP51448 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RoraP51448 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
RoraP51448 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
RoraP51448 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RoraP51448 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC13.88□□□□□ -0.19
RoraP51448 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
RoraP51448 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
RoraP51448 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
RoraP51448 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RoraP51448 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RoraP51448 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC13.88□□□□□ -0.19
RoraP51448 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
RoraP51448 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
RoraP51448 AC126408.1-201ENSMUST00000225184 523 ntBASIC13.88□□□□□ -0.19
RoraP51448 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
RoraP51448 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RoraP51448 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC13.88□□□□□ -0.19
RoraP51448 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RoraP51448 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RoraP51448 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RoraP51448 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RoraP51448 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
RoraP51448 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RoraP51448 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RoraP51448 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RoraP51448 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RoraP51448 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
RoraP51448 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RoraP51448 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RoraP51448 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
RoraP51448 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
RoraP51448 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
RoraP51448 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
RoraP51448 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RoraP51448 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RoraP51448 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RoraP51448 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
RoraP51448 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
RoraP51448 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
RoraP51448 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RoraP51448 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
RoraP51448 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
RoraP51448 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
RoraP51448 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
RoraP51448 Gm7063-201ENSMUST00000186840 981 ntBASIC13.87□□□□□ -0.19
RoraP51448 Klk2-ps-201ENSMUST00000205342 571 ntBASIC13.87□□□□□ -0.19
RoraP51448 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RoraP51448 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RoraP51448 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RoraP51448 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
RoraP51448 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
RoraP51448 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
RoraP51448 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
RoraP51448 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC13.87□□□□□ -0.19
RoraP51448 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RoraP51448 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RoraP51448 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC13.87□□□□□ -0.19
RoraP51448 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
RoraP51448 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
RoraP51448 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC13.87□□□□□ -0.19
RoraP51448 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
RoraP51448 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
RoraP51448 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RoraP51448 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
RoraP51448 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
RoraP51448 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RoraP51448 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
RoraP51448 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RoraP51448 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
RoraP51448 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RoraP51448 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC13.86□□□□□ -0.19
RoraP51448 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RoraP51448 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RoraP51448 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
RoraP51448 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
RoraP51448 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
RoraP51448 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC13.86□□□□□ -0.19
RoraP51448 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC13.86□□□□□ -0.19
RoraP51448 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC13.86□□□□□ -0.19
RoraP51448 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC13.86□□□□□ -0.19
RoraP51448 Gm8116-201ENSMUST00000182917 1201 ntBASIC13.86□□□□□ -0.19
RoraP51448 Gm27622-201ENSMUST00000183779 60 ntBASIC13.86□□□□□ -0.19
RoraP51448 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 62 ms