Protein–RNA interactions for Protein: P49135

Ercc3, General transcription and DNA repair factor IIH helicase subunit XPB, mousemouse

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc3P49135 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC17.42■□□□□ 0.38
Ercc3P49135 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Ercc3P49135 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ercc3P49135 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ercc3P49135 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC17.42■□□□□ 0.38
Ercc3P49135 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC17.42■□□□□ 0.38
Ercc3P49135 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ercc3P49135 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ercc3P49135 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ercc3P49135 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Ercc3P49135 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Ercc3P49135 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ercc3P49135 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ercc3P49135 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Ercc3P49135 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Ercc3P49135 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ercc3P49135 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ercc3P49135 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ercc3P49135 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC17.41■□□□□ 0.38
Ercc3P49135 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Ercc3P49135 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ercc3P49135 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ercc3P49135 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ercc3P49135 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ercc3P49135 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ercc3P49135 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ercc3P49135 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC17.41■□□□□ 0.38
Ercc3P49135 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ercc3P49135 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Ercc3P49135 Gm18889-201ENSMUST00000174284 929 ntBASIC17.41■□□□□ 0.38
Ercc3P49135 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC17.41■□□□□ 0.38
Ercc3P49135 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ercc3P49135 Gm45546-201ENSMUST00000211053 2394 ntBASIC17.41■□□□□ 0.38
Ercc3P49135 CT025626.1-201ENSMUST00000223735 1455 ntBASIC17.41■□□□□ 0.38
Ercc3P49135 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ercc3P49135 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Ercc3P49135 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Ercc3P49135 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ercc3P49135 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ercc3P49135 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ercc3P49135 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Ercc3P49135 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ercc3P49135 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ercc3P49135 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ercc3P49135 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ercc3P49135 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ercc3P49135 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ercc3P49135 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ercc3P49135 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Ercc3P49135 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Ercc3P49135 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ercc3P49135 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ercc3P49135 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ercc3P49135 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ercc3P49135 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Ercc3P49135 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ercc3P49135 Gm26308-201ENSMUST00000157768 69 ntBASIC17.4■□□□□ 0.38
Ercc3P49135 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ercc3P49135 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ercc3P49135 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ercc3P49135 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC17.4■□□□□ 0.38
Ercc3P49135 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Ercc3P49135 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ercc3P49135 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ercc3P49135 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ercc3P49135 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ercc3P49135 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ercc3P49135 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Ercc3P49135 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ercc3P49135 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ercc3P49135 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC17.4■□□□□ 0.38
Ercc3P49135 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ercc3P49135 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.38
Ercc3P49135 Gm13233-201ENSMUST00000118760 1443 ntBASIC17.39■□□□□ 0.38
Ercc3P49135 Gm13244-201ENSMUST00000118855 1446 ntBASIC17.39■□□□□ 0.38
Ercc3P49135 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC17.39■□□□□ 0.37
Ercc3P49135 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Ercc3P49135 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ercc3P49135 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ercc3P49135 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Ercc3P49135 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ercc3P49135 Mir1895-201ENSMUST00000122615 79 ntBASIC17.39■□□□□ 0.37
Ercc3P49135 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC17.39■□□□□ 0.37
Ercc3P49135 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC17.39■□□□□ 0.37
Ercc3P49135 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC17.39■□□□□ 0.37
Ercc3P49135 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ercc3P49135 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC17.39■□□□□ 0.37
Ercc3P49135 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Ercc3P49135 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC17.39■□□□□ 0.37
Ercc3P49135 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Ercc3P49135 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC17.39■□□□□ 0.37
Ercc3P49135 Gm37912-201ENSMUST00000191895 3076 ntBASIC17.39■□□□□ 0.37
Ercc3P49135 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ercc3P49135 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Ercc3P49135 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Ercc3P49135 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Ercc3P49135 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Ercc3P49135 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ercc3P49135 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ercc3P49135 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms