Protein–RNA interactions for Protein: P48437

Prox1, Prospero homeobox protein 1, mousemouse

Predictions only

Length 737 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prox1P48437 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC14.11□□□□□ -0.15
Prox1P48437 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Prox1P48437 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Prox1P48437 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Prox1P48437 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC14.11□□□□□ -0.15
Prox1P48437 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Prox1P48437 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
Prox1P48437 Gm27357-201ENSMUST00000183754 135 ntBASIC14.11□□□□□ -0.15
Prox1P48437 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Prox1P48437 Gm45003-201ENSMUST00000205875 2158 ntBASIC14.11□□□□□ -0.15
Prox1P48437 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC14.11□□□□□ -0.15
Prox1P48437 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
Prox1P48437 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Prox1P48437 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Prox1P48437 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Prox1P48437 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Prox1P48437 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Prox1P48437 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Prox1P48437 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Prox1P48437 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC14.11□□□□□ -0.15
Prox1P48437 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Prox1P48437 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Prox1P48437 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Prox1P48437 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Prox1P48437 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Prox1P48437 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Prox1P48437 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Prox1P48437 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Prox1P48437 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Prox1P48437 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC14.1□□□□□ -0.15
Prox1P48437 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Prox1P48437 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC14.1□□□□□ -0.15
Prox1P48437 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Prox1P48437 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Prox1P48437 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Prox1P48437 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Prox1P48437 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Prox1P48437 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Prox1P48437 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Prox1P48437 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Prox1P48437 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Prox1P48437 AC122901.1-201ENSMUST00000214203 1790 ntBASIC14.1□□□□□ -0.15
Prox1P48437 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Prox1P48437 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC14.1□□□□□ -0.15
Prox1P48437 Gm15372-201ENSMUST00000120729 834 ntBASIC14.1□□□□□ -0.15
Prox1P48437 AC153889.1-201ENSMUST00000219257 330 ntBASIC14.1□□□□□ -0.15
Prox1P48437 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
Prox1P48437 AC124569.2-201ENSMUST00000225998 818 ntBASIC14.1□□□□□ -0.15
Prox1P48437 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Prox1P48437 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Prox1P48437 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Prox1P48437 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Prox1P48437 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Prox1P48437 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Prox1P48437 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Prox1P48437 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Prox1P48437 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Prox1P48437 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Prox1P48437 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Prox1P48437 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC14.1□□□□□ -0.15
Prox1P48437 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Prox1P48437 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC14.09□□□□□ -0.15
Prox1P48437 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Prox1P48437 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Prox1P48437 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Prox1P48437 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Prox1P48437 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC14.09□□□□□ -0.15
Prox1P48437 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Prox1P48437 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Prox1P48437 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Prox1P48437 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Prox1P48437 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Prox1P48437 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Prox1P48437 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Prox1P48437 AC093926.2-201ENSMUST00000214468 1228 ntBASIC14.09□□□□□ -0.15
Prox1P48437 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Prox1P48437 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Prox1P48437 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Prox1P48437 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Prox1P48437 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Prox1P48437 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC14.09□□□□□ -0.15
Prox1P48437 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Prox1P48437 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Prox1P48437 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Prox1P48437 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Prox1P48437 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Prox1P48437 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Prox1P48437 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Prox1P48437 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC14.09□□□□□ -0.15
Prox1P48437 Gm42632-201ENSMUST00000201707 2411 ntBASIC14.09□□□□□ -0.15
Prox1P48437 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Prox1P48437 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC14.09□□□□□ -0.15
Prox1P48437 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Prox1P48437 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC14.08□□□□□ -0.15
Prox1P48437 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Prox1P48437 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Prox1P48437 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Prox1P48437 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Prox1P48437 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC14.08□□□□□ -0.16
Prox1P48437 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC14.08□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms