Protein–RNA interactions for Protein: P47806

Gli1, Zinc finger protein GLI1, mousemouse

Predictions only

Length 1,111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli1P47806 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gli1P47806 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gli1P47806 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gli1P47806 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gli1P47806 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Gli1P47806 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gli1P47806 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Gli1P47806 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gli1P47806 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gli1P47806 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gli1P47806 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gli1P47806 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gli1P47806 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Gli1P47806 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gli1P47806 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Gli1P47806 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC14.34□□□□□ -0.11
Gli1P47806 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Gli1P47806 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Gli1P47806 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
Gli1P47806 Gm44291-201ENSMUST00000203102 2865 ntBASIC14.33□□□□□ -0.11
Gli1P47806 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Gli1P47806 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gli1P47806 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gli1P47806 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gli1P47806 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Gli1P47806 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
Gli1P47806 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gli1P47806 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Gli1P47806 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gli1P47806 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC14.33□□□□□ -0.12
Gli1P47806 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC14.33□□□□□ -0.12
Gli1P47806 Mir3113-201ENSMUST00000175478 76 ntBASIC14.33□□□□□ -0.12
Gli1P47806 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gli1P47806 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gli1P47806 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC14.33□□□□□ -0.12
Gli1P47806 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gli1P47806 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gli1P47806 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gli1P47806 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gli1P47806 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Gli1P47806 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gli1P47806 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Gli1P47806 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gli1P47806 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gli1P47806 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gli1P47806 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gli1P47806 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Gli1P47806 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC14.33□□□□□ -0.12
Gli1P47806 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Gli1P47806 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gli1P47806 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gli1P47806 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gli1P47806 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gli1P47806 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gli1P47806 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gli1P47806 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gli1P47806 AC167013.2-201ENSMUST00000228520 2684 ntBASIC14.32□□□□□ -0.12
Gli1P47806 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC14.32□□□□□ -0.12
Gli1P47806 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Gli1P47806 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gli1P47806 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Gli1P47806 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gli1P47806 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Gli1P47806 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC14.32□□□□□ -0.12
Gli1P47806 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Gli1P47806 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gli1P47806 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gli1P47806 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gli1P47806 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gli1P47806 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Gli1P47806 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gli1P47806 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
Gli1P47806 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Gli1P47806 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Gli1P47806 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC14.32□□□□□ -0.12
Gli1P47806 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC14.32□□□□□ -0.12
Gli1P47806 AC122024.2-201ENSMUST00000220086 871 ntBASIC14.32□□□□□ -0.12
Gli1P47806 Bloc1s5-203ENSMUST00000224902 612 ntBASIC14.32□□□□□ -0.12
Gli1P47806 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gli1P47806 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gli1P47806 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gli1P47806 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Gli1P47806 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gli1P47806 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Gli1P47806 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gli1P47806 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Gli1P47806 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gli1P47806 Gm45293-201ENSMUST00000209754 1812 ntBASIC14.31□□□□□ -0.12
Gli1P47806 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gli1P47806 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gli1P47806 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC14.31□□□□□ -0.12
Gli1P47806 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gli1P47806 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Gli1P47806 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Gli1P47806 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gli1P47806 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Gli1P47806 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gli1P47806 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC14.31□□□□□ -0.12
Gli1P47806 Gm4913-201ENSMUST00000117075 1290 ntBASIC14.31□□□□□ -0.12
Gli1P47806 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms