Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC14.89□□□□□ -0.03
Vps4bP46467 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Vps4bP46467 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC14.89□□□□□ -0.03
Vps4bP46467 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Vps4bP46467 Gm44981-201ENSMUST00000205549 1943 ntBASIC14.89□□□□□ -0.03
Vps4bP46467 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Vps4bP46467 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Vps4bP46467 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Vps4bP46467 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Vps4bP46467 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Vps4bP46467 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC14.89□□□□□ -0.03
Vps4bP46467 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Vps4bP46467 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Vps4bP46467 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Vps4bP46467 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Vps4bP46467 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
Vps4bP46467 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Vps4bP46467 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC14.89□□□□□ -0.03
Vps4bP46467 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Vps4bP46467 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Vps4bP46467 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Vps4bP46467 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Vps4bP46467 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Vps4bP46467 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Vps4bP46467 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Vps4bP46467 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Vps4bP46467 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Vps4bP46467 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC14.88□□□□□ -0.03
Vps4bP46467 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC14.88□□□□□ -0.03
Vps4bP46467 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Vps4bP46467 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Vps4bP46467 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Vps4bP46467 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Vps4bP46467 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Vps4bP46467 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Vps4bP46467 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Vps4bP46467 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Vps4bP46467 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Vps4bP46467 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Vps4bP46467 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC14.88□□□□□ -0.03
Vps4bP46467 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Vps4bP46467 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Vps4bP46467 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Vps4bP46467 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Vps4bP46467 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Vps4bP46467 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Vps4bP46467 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Vps4bP46467 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Vps4bP46467 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Vps4bP46467 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Vps4bP46467 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Vps4bP46467 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Vps4bP46467 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Vps4bP46467 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Vps4bP46467 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC14.87□□□□□ -0.03
Vps4bP46467 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Vps4bP46467 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC14.87□□□□□ -0.03
Vps4bP46467 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Vps4bP46467 Gm13036-201ENSMUST00000117799 748 ntBASIC14.87□□□□□ -0.03
Vps4bP46467 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
Vps4bP46467 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Vps4bP46467 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Vps4bP46467 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC14.87□□□□□ -0.03
Vps4bP46467 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Vps4bP46467 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Vps4bP46467 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Vps4bP46467 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Vps4bP46467 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Vps4bP46467 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Vps4bP46467 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Vps4bP46467 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC14.87□□□□□ -0.03
Vps4bP46467 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Vps4bP46467 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
Vps4bP46467 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Vps4bP46467 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Vps4bP46467 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC14.87□□□□□ -0.03
Vps4bP46467 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Vps4bP46467 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Vps4bP46467 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Vps4bP46467 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Vps4bP46467 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Vps4bP46467 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Vps4bP46467 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Vps4bP46467 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Vps4bP46467 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Vps4bP46467 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC14.86□□□□□ -0.03
Vps4bP46467 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Vps4bP46467 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC14.86□□□□□ -0.03
Vps4bP46467 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC14.86□□□□□ -0.03
Vps4bP46467 Gm43332-201ENSMUST00000202511 1044 ntBASIC14.86□□□□□ -0.03
Vps4bP46467 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Vps4bP46467 Gm5364-201ENSMUST00000216789 889 ntBASIC14.86□□□□□ -0.03
Vps4bP46467 AC131709.1-201ENSMUST00000224731 1180 ntBASIC14.86□□□□□ -0.03
Vps4bP46467 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Vps4bP46467 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Vps4bP46467 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Vps4bP46467 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Vps4bP46467 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Vps4bP46467 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Vps4bP46467 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms