Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC14.05□□□□□ -0.16
Sox18P43680 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sox18P43680 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sox18P43680 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sox18P43680 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sox18P43680 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Sox18P43680 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Sox18P43680 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sox18P43680 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sox18P43680 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Sox18P43680 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Sox18P43680 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sox18P43680 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Sox18P43680 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sox18P43680 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sox18P43680 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC14.05□□□□□ -0.16
Sox18P43680 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sox18P43680 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC14.05□□□□□ -0.16
Sox18P43680 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sox18P43680 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sox18P43680 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sox18P43680 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Sox18P43680 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Sox18P43680 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sox18P43680 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sox18P43680 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sox18P43680 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sox18P43680 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sox18P43680 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC14.04□□□□□ -0.16
Sox18P43680 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sox18P43680 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sox18P43680 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sox18P43680 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Sox18P43680 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Sox18P43680 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC14.04□□□□□ -0.16
Sox18P43680 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Sox18P43680 Gm12742-201ENSMUST00000117326 410 ntBASIC14.04□□□□□ -0.16
Sox18P43680 Mir1897-201ENSMUST00000122581 272 ntBASIC14.04□□□□□ -0.16
Sox18P43680 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Sox18P43680 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC14.04□□□□□ -0.16
Sox18P43680 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Sox18P43680 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sox18P43680 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC14.04□□□□□ -0.16
Sox18P43680 AC125117.2-201ENSMUST00000228344 1140 ntBASIC14.04□□□□□ -0.16
Sox18P43680 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Sox18P43680 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC14.04□□□□□ -0.16
Sox18P43680 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC14.04□□□□□ -0.16
Sox18P43680 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sox18P43680 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sox18P43680 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sox18P43680 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sox18P43680 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sox18P43680 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sox18P43680 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Sox18P43680 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sox18P43680 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sox18P43680 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Sox18P43680 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sox18P43680 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sox18P43680 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC14.04□□□□□ -0.16
Sox18P43680 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Sox18P43680 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Sox18P43680 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sox18P43680 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sox18P43680 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Sox18P43680 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sox18P43680 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sox18P43680 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sox18P43680 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sox18P43680 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC14.03□□□□□ -0.16
Sox18P43680 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC14.03□□□□□ -0.16
Sox18P43680 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sox18P43680 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC14.03□□□□□ -0.16
Sox18P43680 Gm9522-201ENSMUST00000182394 926 ntBASIC14.03□□□□□ -0.16
Sox18P43680 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sox18P43680 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Sox18P43680 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Sox18P43680 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC14.03□□□□□ -0.16
Sox18P43680 Gm45841-201ENSMUST00000207700 164 ntBASIC14.03□□□□□ -0.16
Sox18P43680 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC14.03□□□□□ -0.16
Sox18P43680 Gm5035-201ENSMUST00000215581 927 ntBASIC14.03□□□□□ -0.16
Sox18P43680 AC124408.1-201ENSMUST00000228938 707 ntBASIC14.03□□□□□ -0.16
Sox18P43680 Gm10271-201ENSMUST00000092165 156 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Sox18P43680 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sox18P43680 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Sox18P43680 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sox18P43680 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sox18P43680 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sox18P43680 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC14.03□□□□□ -0.16
Sox18P43680 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sox18P43680 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Sox18P43680 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Sox18P43680 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Sox18P43680 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Sox18P43680 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC14.03□□□□□ -0.16
Sox18P43680 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sox18P43680 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sox18P43680 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sox18P43680 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sox18P43680 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms