Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Gm42918-201ENSMUST00000199249 1580 ntBASIC13.88□□□□□ -0.19
Cdx2P43241 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cdx2P43241 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cdx2P43241 Gm42901-201ENSMUST00000197735 3171 ntBASIC13.87□□□□□ -0.19
Cdx2P43241 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Cdx2P43241 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cdx2P43241 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cdx2P43241 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cdx2P43241 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cdx2P43241 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC13.87□□□□□ -0.19
Cdx2P43241 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Cdx2P43241 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC13.87□□□□□ -0.19
Cdx2P43241 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cdx2P43241 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC13.87□□□□□ -0.19
Cdx2P43241 Gm13829-201ENSMUST00000119600 138 ntBASIC13.87□□□□□ -0.19
Cdx2P43241 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC13.87□□□□□ -0.19
Cdx2P43241 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cdx2P43241 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cdx2P43241 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cdx2P43241 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cdx2P43241 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cdx2P43241 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Cdx2P43241 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cdx2P43241 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cdx2P43241 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC13.87□□□□□ -0.19
Cdx2P43241 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC13.87□□□□□ -0.19
Cdx2P43241 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cdx2P43241 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cdx2P43241 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cdx2P43241 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC13.87□□□□□ -0.19
Cdx2P43241 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC13.87□□□□□ -0.19
Cdx2P43241 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cdx2P43241 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cdx2P43241 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Cdx2P43241 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Cdx2P43241 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cdx2P43241 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cdx2P43241 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC13.86□□□□□ -0.19
Cdx2P43241 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cdx2P43241 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cdx2P43241 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC13.86□□□□□ -0.19
Cdx2P43241 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC13.86□□□□□ -0.19
Cdx2P43241 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cdx2P43241 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC13.86□□□□□ -0.19
Cdx2P43241 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Cdx2P43241 Mir7085-201ENSMUST00000184353 66 ntBASIC13.86□□□□□ -0.19
Cdx2P43241 Gm44719-201ENSMUST00000206404 149 ntBASIC13.86□□□□□ -0.19
Cdx2P43241 Gm18062-201ENSMUST00000208020 547 ntBASIC13.86□□□□□ -0.19
Cdx2P43241 Gm18055-201ENSMUST00000208254 547 ntBASIC13.86□□□□□ -0.19
Cdx2P43241 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cdx2P43241 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC13.86□□□□□ -0.19
Cdx2P43241 AC155286.1-201ENSMUST00000218632 448 ntBASIC13.86□□□□□ -0.19
Cdx2P43241 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Cdx2P43241 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cdx2P43241 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Cdx2P43241 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Cdx2P43241 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cdx2P43241 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Cdx2P43241 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Cdx2P43241 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cdx2P43241 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cdx2P43241 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cdx2P43241 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cdx2P43241 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Cdx2P43241 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cdx2P43241 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cdx2P43241 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cdx2P43241 Gm21009-201ENSMUST00000197169 1669 ntBASIC13.85□□□□□ -0.19
Cdx2P43241 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cdx2P43241 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Cdx2P43241 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC13.85□□□□□ -0.19
Cdx2P43241 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cdx2P43241 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cdx2P43241 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cdx2P43241 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cdx2P43241 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Cdx2P43241 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC13.85□□□□□ -0.19
Cdx2P43241 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Cdx2P43241 Gm12585-201ENSMUST00000117307 290 ntBASIC13.85□□□□□ -0.19
Cdx2P43241 Gm15824-201ENSMUST00000119516 955 ntBASIC13.85□□□□□ -0.19
Cdx2P43241 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Cdx2P43241 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC13.85□□□□□ -0.19
Cdx2P43241 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Cdx2P43241 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Cdx2P43241 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cdx2P43241 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cdx2P43241 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cdx2P43241 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cdx2P43241 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cdx2P43241 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cdx2P43241 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cdx2P43241 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cdx2P43241 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cdx2P43241 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cdx2P43241 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC13.85□□□□□ -0.19
Cdx2P43241 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cdx2P43241 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cdx2P43241 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cdx2P43241 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cdx2P43241 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms