Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Cxcl12P40224 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC15□□□□□ -0.01
Cxcl12P40224 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cxcl12P40224 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cxcl12P40224 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cxcl12P40224 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
Cxcl12P40224 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cxcl12P40224 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Cxcl12P40224 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Cxcl12P40224 Gm11661-201ENSMUST00000121761 1327 ntBASIC15□□□□□ -0.01
Cxcl12P40224 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC15□□□□□ -0.01
Cxcl12P40224 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC15□□□□□ -0.01
Cxcl12P40224 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Cxcl12P40224 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Cxcl12P40224 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cxcl12P40224 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC15□□□□□ -0.01
Cxcl12P40224 Gm14660-201ENSMUST00000119809 575 ntBASIC15□□□□□ -0.01
Cxcl12P40224 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC15□□□□□ -0.01
Cxcl12P40224 Gm9726-201ENSMUST00000180321 678 ntBASIC15□□□□□ -0.01
Cxcl12P40224 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC15□□□□□ -0.01
Cxcl12P40224 Gm43179-201ENSMUST00000198797 275 ntBASIC15□□□□□ -0.01
Cxcl12P40224 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cxcl12P40224 AC110817.1-201ENSMUST00000225706 605 ntBASIC15□□□□□ -0.01
Cxcl12P40224 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Cxcl12P40224 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC15□□□□□ -0.01
Cxcl12P40224 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC15□□□□□ -0.01
Cxcl12P40224 Gm10313-201ENSMUST00000095320 1002 ntBASIC15□□□□□ -0.01
Cxcl12P40224 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cxcl12P40224 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cxcl12P40224 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cxcl12P40224 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cxcl12P40224 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cxcl12P40224 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Cxcl12P40224 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC15□□□□□ -0.01
Cxcl12P40224 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cxcl12P40224 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Cxcl12P40224 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cxcl12P40224 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC14.99□□□□□ -0.01
Cxcl12P40224 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Cxcl12P40224 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cxcl12P40224 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Cxcl12P40224 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC14.99□□□□□ -0.01
Cxcl12P40224 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC14.99□□□□□ -0.01
Cxcl12P40224 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Cxcl12P40224 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC14.99□□□□□ -0.01
Cxcl12P40224 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Cxcl12P40224 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cxcl12P40224 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cxcl12P40224 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cxcl12P40224 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cxcl12P40224 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Cxcl12P40224 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cxcl12P40224 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Cxcl12P40224 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cxcl12P40224 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC14.99□□□□□ -0.01
Cxcl12P40224 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cxcl12P40224 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cxcl12P40224 Gm42473-201ENSMUST00000201056 2291 ntBASIC14.99□□□□□ -0.01
Cxcl12P40224 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cxcl12P40224 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cxcl12P40224 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cxcl12P40224 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Cxcl12P40224 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cxcl12P40224 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Cxcl12P40224 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Cxcl12P40224 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cxcl12P40224 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cxcl12P40224 Zscan30-202ENSMUST00000224144 1458 ntBASIC14.98□□□□□ -0.01
Cxcl12P40224 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cxcl12P40224 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC14.98□□□□□ -0.01
Cxcl12P40224 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Cxcl12P40224 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cxcl12P40224 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC14.98□□□□□ -0.01
Cxcl12P40224 AC154806.6-201ENSMUST00000228192 202 ntBASIC14.98□□□□□ -0.01
Cxcl12P40224 AC121598.1-201ENSMUST00000228224 1019 ntBASIC14.98□□□□□ -0.01
Cxcl12P40224 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC14.98□□□□□ -0.01
Cxcl12P40224 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Cxcl12P40224 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cxcl12P40224 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cxcl12P40224 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cxcl12P40224 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC14.98□□□□□ -0.01
Cxcl12P40224 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cxcl12P40224 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Cxcl12P40224 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cxcl12P40224 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cxcl12P40224 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Cxcl12P40224 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cxcl12P40224 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cxcl12P40224 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Cxcl12P40224 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC14.97□□□□□ -0.01
Cxcl12P40224 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cxcl12P40224 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Cxcl12P40224 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Cxcl12P40224 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cxcl12P40224 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cxcl12P40224 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cxcl12P40224 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cxcl12P40224 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cxcl12P40224 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cxcl12P40224 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 58.4 ms