Protein–RNA interactions for Protein: P39689

Cdkn1a, Cyclin-dependent kinase inhibitor 1, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn1aP39689 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cdkn1aP39689 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cdkn1aP39689 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cdkn1aP39689 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC12.1□□□□□ -0.47
Cdkn1aP39689 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Cdkn1aP39689 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC12.1□□□□□ -0.47
Cdkn1aP39689 Gm4691-201ENSMUST00000182339 1000 ntBASIC12.1□□□□□ -0.47
Cdkn1aP39689 Gm27622-201ENSMUST00000183779 60 ntBASIC12.1□□□□□ -0.47
Cdkn1aP39689 Gm37277-201ENSMUST00000194052 1111 ntBASIC12.1□□□□□ -0.47
Cdkn1aP39689 Gm2451-201ENSMUST00000199447 999 ntBASIC12.1□□□□□ -0.47
Cdkn1aP39689 Gm10290-201ENSMUST00000200451 999 ntBASIC12.1□□□□□ -0.47
Cdkn1aP39689 AC126408.1-201ENSMUST00000225184 523 ntBASIC12.1□□□□□ -0.47
Cdkn1aP39689 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cdkn1aP39689 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cdkn1aP39689 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Cdkn1aP39689 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Cdkn1aP39689 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Cdkn1aP39689 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Cdkn1aP39689 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cdkn1aP39689 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Cdkn1aP39689 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cdkn1aP39689 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Cdkn1aP39689 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cdkn1aP39689 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cdkn1aP39689 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Cdkn1aP39689 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cdkn1aP39689 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC12.1□□□□□ -0.47
Cdkn1aP39689 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cdkn1aP39689 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cdkn1aP39689 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Cdkn1aP39689 Gm14780-201ENSMUST00000118387 2737 ntBASIC12.1□□□□□ -0.47
Cdkn1aP39689 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC12.09□□□□□ -0.47
Cdkn1aP39689 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Cdkn1aP39689 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cdkn1aP39689 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cdkn1aP39689 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cdkn1aP39689 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cdkn1aP39689 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC12.09□□□□□ -0.47
Cdkn1aP39689 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cdkn1aP39689 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Cdkn1aP39689 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cdkn1aP39689 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cdkn1aP39689 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cdkn1aP39689 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cdkn1aP39689 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cdkn1aP39689 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cdkn1aP39689 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cdkn1aP39689 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cdkn1aP39689 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cdkn1aP39689 Gm15693-201ENSMUST00000120470 637 ntBASIC12.09□□□□□ -0.47
Cdkn1aP39689 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC12.09□□□□□ -0.47
Cdkn1aP39689 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cdkn1aP39689 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC12.09□□□□□ -0.47
Cdkn1aP39689 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cdkn1aP39689 Gm20949-201ENSMUST00000206478 952 ntBASIC12.09□□□□□ -0.47
Cdkn1aP39689 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cdkn1aP39689 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cdkn1aP39689 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cdkn1aP39689 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cdkn1aP39689 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cdkn1aP39689 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cdkn1aP39689 Gm38058-201ENSMUST00000194323 4368 ntBASIC12.09□□□□□ -0.47
Cdkn1aP39689 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cdkn1aP39689 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Cdkn1aP39689 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cdkn1aP39689 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cdkn1aP39689 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cdkn1aP39689 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cdkn1aP39689 Gm42466-201ENSMUST00000202099 1301 ntBASIC12.09□□□□□ -0.47
Cdkn1aP39689 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cdkn1aP39689 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC12.08□□□□□ -0.47
Cdkn1aP39689 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC12.08□□□□□ -0.47
Cdkn1aP39689 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.47
Cdkn1aP39689 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.47
Cdkn1aP39689 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cdkn1aP39689 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cdkn1aP39689 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cdkn1aP39689 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cdkn1aP39689 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cdkn1aP39689 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Cdkn1aP39689 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cdkn1aP39689 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cdkn1aP39689 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Cdkn1aP39689 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Cdkn1aP39689 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cdkn1aP39689 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC12.08□□□□□ -0.48
Cdkn1aP39689 Gm14057-201ENSMUST00000120631 482 ntBASIC12.08□□□□□ -0.48
Cdkn1aP39689 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cdkn1aP39689 Gm9726-201ENSMUST00000180321 678 ntBASIC12.08□□□□□ -0.48
Cdkn1aP39689 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cdkn1aP39689 Gm29541-201ENSMUST00000191351 678 ntBASIC12.08□□□□□ -0.48
Cdkn1aP39689 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cdkn1aP39689 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cdkn1aP39689 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cdkn1aP39689 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cdkn1aP39689 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cdkn1aP39689 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Cdkn1aP39689 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cdkn1aP39689 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cdkn1aP39689 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms