Protein–RNA interactions for Protein: P38575

Upk2, Uroplakin-2, mousemouse

Predictions only

Length 184 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk2P38575 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Upk2P38575 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Upk2P38575 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Upk2P38575 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Upk2P38575 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Upk2P38575 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Upk2P38575 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Upk2P38575 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Upk2P38575 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Upk2P38575 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Upk2P38575 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Upk2P38575 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Upk2P38575 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Upk2P38575 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Upk2P38575 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC12.86□□□□□ -0.35
Upk2P38575 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Upk2P38575 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Upk2P38575 Gm10676-201ENSMUST00000098778 3221 ntBASIC12.86□□□□□ -0.35
Upk2P38575 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC12.86□□□□□ -0.35
Upk2P38575 Gm12892-201ENSMUST00000117367 1146 ntBASIC12.86□□□□□ -0.35
Upk2P38575 Gm12260-201ENSMUST00000122447 411 ntBASIC12.86□□□□□ -0.35
Upk2P38575 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC12.86□□□□□ -0.35
Upk2P38575 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC12.86□□□□□ -0.35
Upk2P38575 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC12.86□□□□□ -0.35
Upk2P38575 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC12.86□□□□□ -0.35
Upk2P38575 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Upk2P38575 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Upk2P38575 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Upk2P38575 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Upk2P38575 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC12.86□□□□□ -0.35
Upk2P38575 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Upk2P38575 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Upk2P38575 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Upk2P38575 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC12.86□□□□□ -0.35
Upk2P38575 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Upk2P38575 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Upk2P38575 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Upk2P38575 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC12.86□□□□□ -0.35
Upk2P38575 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Upk2P38575 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Upk2P38575 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Upk2P38575 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Upk2P38575 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Upk2P38575 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC12.85□□□□□ -0.35
Upk2P38575 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Upk2P38575 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Upk2P38575 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC12.85□□□□□ -0.35
Upk2P38575 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Upk2P38575 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Upk2P38575 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC12.85□□□□□ -0.35
Upk2P38575 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Upk2P38575 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Upk2P38575 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Upk2P38575 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Upk2P38575 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC12.85□□□□□ -0.35
Upk2P38575 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Upk2P38575 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC12.85□□□□□ -0.35
Upk2P38575 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Upk2P38575 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Upk2P38575 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC12.85□□□□□ -0.35
Upk2P38575 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Upk2P38575 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Upk2P38575 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Upk2P38575 Gm45683-201ENSMUST00000210825 1247 ntBASIC12.85□□□□□ -0.35
Upk2P38575 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC12.85□□□□□ -0.35
Upk2P38575 Gm9182-201ENSMUST00000217829 639 ntBASIC12.85□□□□□ -0.35
Upk2P38575 AC090659.1-201ENSMUST00000224334 768 ntBASIC12.85□□□□□ -0.35
Upk2P38575 CT025555.1-201ENSMUST00000225901 1217 ntBASIC12.85□□□□□ -0.35
Upk2P38575 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Upk2P38575 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Upk2P38575 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Upk2P38575 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Upk2P38575 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Upk2P38575 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Upk2P38575 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Upk2P38575 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Upk2P38575 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC12.85□□□□□ -0.35
Upk2P38575 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Upk2P38575 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Upk2P38575 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC12.85□□□□□ -0.35
Upk2P38575 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC12.85□□□□□ -0.35
Upk2P38575 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Upk2P38575 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC12.85□□□□□ -0.35
Upk2P38575 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Upk2P38575 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC12.85□□□□□ -0.35
Upk2P38575 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Upk2P38575 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Upk2P38575 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Upk2P38575 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Upk2P38575 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Upk2P38575 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Upk2P38575 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Upk2P38575 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Upk2P38575 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Upk2P38575 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
Upk2P38575 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Upk2P38575 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Upk2P38575 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC12.84□□□□□ -0.35
Upk2P38575 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC12.84□□□□□ -0.35
Upk2P38575 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms