Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
LdlrP35951 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
LdlrP35951 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LdlrP35951 Auts2-212ENSMUST00000178555 309 ntBASIC14.61□□□□□ -0.07
LdlrP35951 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC14.61□□□□□ -0.07
LdlrP35951 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC14.61□□□□□ -0.07
LdlrP35951 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
LdlrP35951 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC14.61□□□□□ -0.07
LdlrP35951 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
LdlrP35951 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LdlrP35951 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
LdlrP35951 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LdlrP35951 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
LdlrP35951 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC14.61□□□□□ -0.07
LdlrP35951 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
LdlrP35951 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LdlrP35951 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LdlrP35951 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LdlrP35951 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LdlrP35951 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
LdlrP35951 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
LdlrP35951 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
LdlrP35951 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
LdlrP35951 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LdlrP35951 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LdlrP35951 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
LdlrP35951 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
LdlrP35951 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LdlrP35951 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LdlrP35951 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
LdlrP35951 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LdlrP35951 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LdlrP35951 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
LdlrP35951 Gm10576-201ENSMUST00000191927 825 ntBASIC14.6□□□□□ -0.07
LdlrP35951 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
LdlrP35951 AC151286.1-201ENSMUST00000198489 145 ntBASIC14.6□□□□□ -0.07
LdlrP35951 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
LdlrP35951 AC164567.1-201ENSMUST00000219185 960 ntBASIC14.6□□□□□ -0.07
LdlrP35951 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LdlrP35951 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC14.6□□□□□ -0.07
LdlrP35951 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LdlrP35951 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC14.6□□□□□ -0.07
LdlrP35951 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC14.6□□□□□ -0.07
LdlrP35951 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
LdlrP35951 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
LdlrP35951 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LdlrP35951 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LdlrP35951 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
LdlrP35951 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC14.6□□□□□ -0.07
LdlrP35951 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC14.6□□□□□ -0.07
LdlrP35951 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC14.6□□□□□ -0.07
LdlrP35951 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LdlrP35951 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
LdlrP35951 AC159649.2-201ENSMUST00000222984 3223 ntBASIC14.6□□□□□ -0.07
LdlrP35951 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LdlrP35951 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LdlrP35951 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
LdlrP35951 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LdlrP35951 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LdlrP35951 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
LdlrP35951 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LdlrP35951 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC14.59□□□□□ -0.07
LdlrP35951 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
LdlrP35951 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC14.59□□□□□ -0.07
LdlrP35951 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC14.59□□□□□ -0.07
LdlrP35951 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC14.59□□□□□ -0.07
LdlrP35951 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
LdlrP35951 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC14.59□□□□□ -0.07
LdlrP35951 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC14.59□□□□□ -0.07
LdlrP35951 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
LdlrP35951 Gm26308-201ENSMUST00000157768 69 ntBASIC14.59□□□□□ -0.07
LdlrP35951 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
LdlrP35951 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LdlrP35951 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LdlrP35951 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LdlrP35951 AC122901.1-201ENSMUST00000214203 1790 ntBASIC14.59□□□□□ -0.07
LdlrP35951 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LdlrP35951 Gm3928-201ENSMUST00000121141 1307 ntBASIC14.59□□□□□ -0.07
LdlrP35951 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LdlrP35951 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC14.59□□□□□ -0.07
LdlrP35951 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
LdlrP35951 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
LdlrP35951 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.07
LdlrP35951 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LdlrP35951 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC14.58□□□□□ -0.08
LdlrP35951 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LdlrP35951 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC14.58□□□□□ -0.08
LdlrP35951 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
LdlrP35951 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LdlrP35951 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LdlrP35951 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LdlrP35951 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LdlrP35951 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
LdlrP35951 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
LdlrP35951 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LdlrP35951 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
LdlrP35951 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
LdlrP35951 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC14.58□□□□□ -0.08
LdlrP35951 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
LdlrP35951 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms