Protein–RNA interactions for Protein: P33435

Mmp13, Collagenase 3, mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp13P33435 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Mmp13P33435 AC122901.1-201ENSMUST00000214203 1790 ntBASIC15.03■□□□□ -0
Mmp13P33435 Gm5184-201ENSMUST00000220417 1702 ntBASIC15.03■□□□□ -0
Mmp13P33435 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Mmp13P33435 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC15.03■□□□□ -0
Mmp13P33435 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Mmp13P33435 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC15.02■□□□□ -0
Mmp13P33435 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Mmp13P33435 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC15.02■□□□□ -0
Mmp13P33435 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Mmp13P33435 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Mmp13P33435 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Mmp13P33435 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Mmp13P33435 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC15.02■□□□□ -0
Mmp13P33435 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Mmp13P33435 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Mmp13P33435 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Mmp13P33435 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Mmp13P33435 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC15.02■□□□□ -0
Mmp13P33435 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Mmp13P33435 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Mmp13P33435 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Mmp13P33435 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC15.02■□□□□ -0
Mmp13P33435 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Mmp13P33435 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Mmp13P33435 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
Mmp13P33435 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC15.02■□□□□ -0
Mmp13P33435 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC15.02■□□□□ -0
Mmp13P33435 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC15.02■□□□□ -0
Mmp13P33435 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC15.02■□□□□ -0
Mmp13P33435 AC084391.1-201ENSMUST00000200651 141 ntBASIC15.02■□□□□ -0
Mmp13P33435 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC15.02■□□□□ -0
Mmp13P33435 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Mmp13P33435 AC164567.1-201ENSMUST00000219185 960 ntBASIC15.02■□□□□ -0
Mmp13P33435 AC131709.1-201ENSMUST00000224731 1180 ntBASIC15.02■□□□□ -0
Mmp13P33435 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Mmp13P33435 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Mmp13P33435 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC15.02■□□□□ -0
Mmp13P33435 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC15.02■□□□□ -0
Mmp13P33435 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Mmp13P33435 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC15.02□□□□□ -0.01
Mmp13P33435 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Mmp13P33435 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Mmp13P33435 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC15.02□□□□□ -0.01
Mmp13P33435 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Mmp13P33435 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Mmp13P33435 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Mmp13P33435 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC15.02□□□□□ -0.01
Mmp13P33435 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Mmp13P33435 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Mmp13P33435 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Mmp13P33435 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Mmp13P33435 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Mmp13P33435 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC15.01□□□□□ -0.01
Mmp13P33435 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Mmp13P33435 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Mmp13P33435 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Mmp13P33435 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Mmp13P33435 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Mmp13P33435 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Mmp13P33435 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Mmp13P33435 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Mmp13P33435 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Mmp13P33435 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC15.01□□□□□ -0.01
Mmp13P33435 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC15.01□□□□□ -0.01
Mmp13P33435 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Mmp13P33435 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Mmp13P33435 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Mmp13P33435 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Mmp13P33435 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Mmp13P33435 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Mmp13P33435 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Mmp13P33435 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Mmp13P33435 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC15.01□□□□□ -0.01
Mmp13P33435 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Mmp13P33435 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Mmp13P33435 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC15.01□□□□□ -0.01
Mmp13P33435 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Mmp13P33435 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Mmp13P33435 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Mmp13P33435 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Mmp13P33435 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Mmp13P33435 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Mmp13P33435 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Mmp13P33435 Gm11873-201ENSMUST00000117877 1304 ntBASIC15□□□□□ -0.01
Mmp13P33435 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Mmp13P33435 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC15□□□□□ -0.01
Mmp13P33435 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Mmp13P33435 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Mmp13P33435 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Mmp13P33435 Gm4899-201ENSMUST00000178708 719 ntBASIC15□□□□□ -0.01
Mmp13P33435 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Mmp13P33435 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC15□□□□□ -0.01
Mmp13P33435 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Mmp13P33435 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC15□□□□□ -0.01
Mmp13P33435 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Mmp13P33435 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC15□□□□□ -0.01
Mmp13P33435 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Mmp13P33435 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Mmp13P33435 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms