Protein–RNA interactions for Protein: P27548

Cd40lg, CD40 ligand, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40lgP27548 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Cd40lgP27548 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cd40lgP27548 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cd40lgP27548 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cd40lgP27548 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cd40lgP27548 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Cd40lgP27548 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cd40lgP27548 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Cd40lgP27548 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Cd40lgP27548 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cd40lgP27548 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cd40lgP27548 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Cd40lgP27548 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC13.54□□□□□ -0.24
Cd40lgP27548 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Cd40lgP27548 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Cd40lgP27548 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC13.54□□□□□ -0.24
Cd40lgP27548 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cd40lgP27548 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC13.54□□□□□ -0.24
Cd40lgP27548 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC13.54□□□□□ -0.24
Cd40lgP27548 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cd40lgP27548 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cd40lgP27548 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cd40lgP27548 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cd40lgP27548 Gm5867-201ENSMUST00000063197 592 ntBASIC13.54□□□□□ -0.24
Cd40lgP27548 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Cd40lgP27548 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cd40lgP27548 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cd40lgP27548 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cd40lgP27548 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cd40lgP27548 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cd40lgP27548 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cd40lgP27548 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Cd40lgP27548 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cd40lgP27548 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Cd40lgP27548 Gm11960-202ENSMUST00000181063 2858 ntBASIC13.54□□□□□ -0.24
Cd40lgP27548 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cd40lgP27548 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cd40lgP27548 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Cd40lgP27548 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Cd40lgP27548 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Cd40lgP27548 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cd40lgP27548 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cd40lgP27548 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Cd40lgP27548 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC13.53□□□□□ -0.24
Cd40lgP27548 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cd40lgP27548 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Cd40lgP27548 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Cd40lgP27548 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Cd40lgP27548 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cd40lgP27548 Thap2-203ENSMUST00000218989 527 ntBASIC13.53□□□□□ -0.24
Cd40lgP27548 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Cd40lgP27548 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cd40lgP27548 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC13.53□□□□□ -0.24
Cd40lgP27548 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cd40lgP27548 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC13.53□□□□□ -0.24
Cd40lgP27548 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cd40lgP27548 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cd40lgP27548 Gm13410-201ENSMUST00000117058 1415 ntBASIC13.53□□□□□ -0.24
Cd40lgP27548 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cd40lgP27548 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Cd40lgP27548 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cd40lgP27548 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Cd40lgP27548 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Cd40lgP27548 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cd40lgP27548 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
Cd40lgP27548 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.24
Cd40lgP27548 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.24
Cd40lgP27548 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Cd40lgP27548 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Cd40lgP27548 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Cd40lgP27548 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Cd40lgP27548 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC13.52□□□□□ -0.24
Cd40lgP27548 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Cd40lgP27548 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Cd40lgP27548 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Cd40lgP27548 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC13.52□□□□□ -0.25
Cd40lgP27548 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC13.52□□□□□ -0.25
Cd40lgP27548 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Cd40lgP27548 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC13.52□□□□□ -0.25
Cd40lgP27548 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Cd40lgP27548 Gm2272-201ENSMUST00000194903 582 ntBASIC13.52□□□□□ -0.25
Cd40lgP27548 Gm44492-201ENSMUST00000197012 141 ntBASIC13.52□□□□□ -0.25
Cd40lgP27548 Gm44945-201ENSMUST00000206764 1187 ntBASIC13.52□□□□□ -0.25
Cd40lgP27548 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC13.52□□□□□ -0.25
Cd40lgP27548 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Cd40lgP27548 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC13.52□□□□□ -0.25
Cd40lgP27548 CT009510.1-201ENSMUST00000227972 270 ntBASIC13.52□□□□□ -0.25
Cd40lgP27548 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cd40lgP27548 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cd40lgP27548 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC13.52□□□□□ -0.25
Cd40lgP27548 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cd40lgP27548 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC13.52□□□□□ -0.25
Cd40lgP27548 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cd40lgP27548 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cd40lgP27548 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cd40lgP27548 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cd40lgP27548 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cd40lgP27548 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cd40lgP27548 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Cd40lgP27548 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 57.8 ms