Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col8a2P25318 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Col8a2P25318 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col8a2P25318 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col8a2P25318 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC12.25□□□□□ -0.45
Col8a2P25318 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col8a2P25318 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Col8a2P25318 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col8a2P25318 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Col8a2P25318 Trav13-3-201ENSMUST00000117226 336 ntBASIC12.25□□□□□ -0.45
Col8a2P25318 Gm13223-201ENSMUST00000118609 747 ntBASIC12.25□□□□□ -0.45
Col8a2P25318 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
Col8a2P25318 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC12.25□□□□□ -0.45
Col8a2P25318 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col8a2P25318 Gm24158-201ENSMUST00000175263 71 ntBASIC12.25□□□□□ -0.45
Col8a2P25318 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Col8a2P25318 Gm27618-201ENSMUST00000183671 60 ntBASIC12.25□□□□□ -0.45
Col8a2P25318 Gm38225-201ENSMUST00000194001 393 ntBASIC12.25□□□□□ -0.45
Col8a2P25318 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col8a2P25318 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col8a2P25318 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col8a2P25318 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Col8a2P25318 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col8a2P25318 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Col8a2P25318 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col8a2P25318 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col8a2P25318 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Col8a2P25318 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col8a2P25318 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col8a2P25318 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC12.25□□□□□ -0.45
Col8a2P25318 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC12.25□□□□□ -0.45
Col8a2P25318 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Col8a2P25318 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Col8a2P25318 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Col8a2P25318 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Col8a2P25318 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC12.25□□□□□ -0.45
Col8a2P25318 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col8a2P25318 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Col8a2P25318 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Col8a2P25318 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col8a2P25318 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col8a2P25318 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Col8a2P25318 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Col8a2P25318 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Col8a2P25318 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Col8a2P25318 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Col8a2P25318 Gm7336-201ENSMUST00000107041 1232 ntBASIC12.24□□□□□ -0.45
Col8a2P25318 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC12.24□□□□□ -0.45
Col8a2P25318 Gm6415-201ENSMUST00000118488 348 ntBASIC12.24□□□□□ -0.45
Col8a2P25318 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC12.24□□□□□ -0.45
Col8a2P25318 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Col8a2P25318 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Col8a2P25318 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Col8a2P25318 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC12.24□□□□□ -0.45
Col8a2P25318 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Col8a2P25318 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Col8a2P25318 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Col8a2P25318 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Col8a2P25318 Gm18766-201ENSMUST00000189811 808 ntBASIC12.24□□□□□ -0.45
Col8a2P25318 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Col8a2P25318 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Col8a2P25318 Gm20949-201ENSMUST00000206478 952 ntBASIC12.24□□□□□ -0.45
Col8a2P25318 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC12.24□□□□□ -0.45
Col8a2P25318 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Col8a2P25318 AC158982.1-201ENSMUST00000228377 901 ntBASIC12.24□□□□□ -0.45
Col8a2P25318 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Col8a2P25318 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Col8a2P25318 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Col8a2P25318 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Col8a2P25318 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Col8a2P25318 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Col8a2P25318 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Col8a2P25318 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Col8a2P25318 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Col8a2P25318 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Col8a2P25318 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Col8a2P25318 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Col8a2P25318 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Col8a2P25318 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Col8a2P25318 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Col8a2P25318 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Col8a2P25318 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Col8a2P25318 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Col8a2P25318 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Col8a2P25318 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Col8a2P25318 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Col8a2P25318 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Col8a2P25318 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Col8a2P25318 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Col8a2P25318 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Col8a2P25318 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Col8a2P25318 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Col8a2P25318 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Col8a2P25318 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Col8a2P25318 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
Col8a2P25318 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Col8a2P25318 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Col8a2P25318 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Col8a2P25318 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Col8a2P25318 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC12.23□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms