Protein–RNA interactions for Protein: P25119

Tnfrsf1b, Tumor necrosis factor receptor superfamily member 1B, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1bP25119 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tnfrsf1bP25119 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Tnfrsf1bP25119 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tnfrsf1bP25119 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tnfrsf1bP25119 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tnfrsf1bP25119 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC13.59□□□□□ -0.23
Tnfrsf1bP25119 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tnfrsf1bP25119 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC13.59□□□□□ -0.23
Tnfrsf1bP25119 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.23
Tnfrsf1bP25119 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.23
Tnfrsf1bP25119 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Tnfrsf1bP25119 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC13.58□□□□□ -0.23
Tnfrsf1bP25119 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Tnfrsf1bP25119 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.23
Tnfrsf1bP25119 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Tnfrsf1bP25119 AC154231.1-201ENSMUST00000220564 2175 ntBASIC13.58□□□□□ -0.24
Tnfrsf1bP25119 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Tnfrsf1bP25119 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Tnfrsf1bP25119 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC13.58□□□□□ -0.24
Tnfrsf1bP25119 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Tnfrsf1bP25119 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Tnfrsf1bP25119 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Tnfrsf1bP25119 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Tnfrsf1bP25119 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Tnfrsf1bP25119 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Tnfrsf1bP25119 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC13.58□□□□□ -0.24
Tnfrsf1bP25119 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Tnfrsf1bP25119 Gm6944-201ENSMUST00000182449 1006 ntBASIC13.58□□□□□ -0.24
Tnfrsf1bP25119 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC13.58□□□□□ -0.24
Tnfrsf1bP25119 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC13.58□□□□□ -0.24
Tnfrsf1bP25119 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Tnfrsf1bP25119 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Tnfrsf1bP25119 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Tnfrsf1bP25119 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Tnfrsf1bP25119 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Tnfrsf1bP25119 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Tnfrsf1bP25119 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Tnfrsf1bP25119 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Tnfrsf1bP25119 Gm6018-201ENSMUST00000216090 1306 ntBASIC13.58□□□□□ -0.24
Tnfrsf1bP25119 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC13.58□□□□□ -0.24
Tnfrsf1bP25119 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Tnfrsf1bP25119 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Tnfrsf1bP25119 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Tnfrsf1bP25119 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC13.58□□□□□ -0.24
Tnfrsf1bP25119 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC13.57□□□□□ -0.24
Tnfrsf1bP25119 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Tnfrsf1bP25119 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Tnfrsf1bP25119 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Tnfrsf1bP25119 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Tnfrsf1bP25119 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Tnfrsf1bP25119 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Tnfrsf1bP25119 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Tnfrsf1bP25119 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
Tnfrsf1bP25119 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Tnfrsf1bP25119 Gm8749-201ENSMUST00000117737 331 ntBASIC13.57□□□□□ -0.24
Tnfrsf1bP25119 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Tnfrsf1bP25119 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC13.57□□□□□ -0.24
Tnfrsf1bP25119 Gm26308-201ENSMUST00000157768 69 ntBASIC13.57□□□□□ -0.24
Tnfrsf1bP25119 Gm18889-201ENSMUST00000174284 929 ntBASIC13.57□□□□□ -0.24
Tnfrsf1bP25119 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC13.57□□□□□ -0.24
Tnfrsf1bP25119 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC13.57□□□□□ -0.24
Tnfrsf1bP25119 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC13.57□□□□□ -0.24
Tnfrsf1bP25119 AC166341.4-201ENSMUST00000220625 123 ntBASIC13.57□□□□□ -0.24
Tnfrsf1bP25119 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Tnfrsf1bP25119 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Tnfrsf1bP25119 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Tnfrsf1bP25119 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Tnfrsf1bP25119 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Tnfrsf1bP25119 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Tnfrsf1bP25119 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC13.57□□□□□ -0.24
Tnfrsf1bP25119 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Tnfrsf1bP25119 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Tnfrsf1bP25119 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Tnfrsf1bP25119 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Tnfrsf1bP25119 Ap5m1-205ENSMUST00000227431 3757 ntBASIC13.56□□□□□ -0.24
Tnfrsf1bP25119 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Tnfrsf1bP25119 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Tnfrsf1bP25119 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Tnfrsf1bP25119 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Tnfrsf1bP25119 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Tnfrsf1bP25119 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Tnfrsf1bP25119 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC13.56□□□□□ -0.24
Tnfrsf1bP25119 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC13.56□□□□□ -0.24
Tnfrsf1bP25119 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Tnfrsf1bP25119 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Tnfrsf1bP25119 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
Tnfrsf1bP25119 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC13.56□□□□□ -0.24
Tnfrsf1bP25119 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC13.56□□□□□ -0.24
Tnfrsf1bP25119 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC13.56□□□□□ -0.24
Tnfrsf1bP25119 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC13.56□□□□□ -0.24
Tnfrsf1bP25119 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Tnfrsf1bP25119 Gm4691-201ENSMUST00000182339 1000 ntBASIC13.56□□□□□ -0.24
Tnfrsf1bP25119 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC13.56□□□□□ -0.24
Tnfrsf1bP25119 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Tnfrsf1bP25119 Gm44335-201ENSMUST00000196879 141 ntBASIC13.56□□□□□ -0.24
Tnfrsf1bP25119 Gm44297-201ENSMUST00000198304 141 ntBASIC13.56□□□□□ -0.24
Tnfrsf1bP25119 Gm44346-201ENSMUST00000198851 141 ntBASIC13.56□□□□□ -0.24
Tnfrsf1bP25119 Gm2451-201ENSMUST00000199447 999 ntBASIC13.56□□□□□ -0.24
Tnfrsf1bP25119 Gm10290-201ENSMUST00000200451 999 ntBASIC13.56□□□□□ -0.24
Tnfrsf1bP25119 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC13.56□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms