Protein–RNA interactions for Protein: P13405

Rb1, Retinoblastoma-associated protein, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rb1P13405 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Rb1P13405 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Rb1P13405 Gm37728-201ENSMUST00000195025 2292 ntBASIC15.05■□□□□ -0
Rb1P13405 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Rb1P13405 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC15.05■□□□□ -0
Rb1P13405 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Rb1P13405 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Rb1P13405 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Rb1P13405 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Rb1P13405 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Rb1P13405 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rb1P13405 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC15.04■□□□□ -0
Rb1P13405 Rbfox2-206ENSMUST00000227314 1810 ntBASIC15.04■□□□□ -0
Rb1P13405 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC15.04■□□□□ -0
Rb1P13405 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rb1P13405 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rb1P13405 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rb1P13405 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Rb1P13405 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rb1P13405 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC15.04■□□□□ -0
Rb1P13405 Rpph1-201ENSMUST00000175096 319 ntBASIC15.04■□□□□ -0
Rb1P13405 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Rb1P13405 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC15.04■□□□□ -0
Rb1P13405 Gm43125-201ENSMUST00000201724 730 ntBASIC15.04■□□□□ -0
Rb1P13405 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Rb1P13405 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC15.04■□□□□ -0
Rb1P13405 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
Rb1P13405 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC15.04■□□□□ -0
Rb1P13405 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rb1P13405 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Rb1P13405 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rb1P13405 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rb1P13405 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rb1P13405 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rb1P13405 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
Rb1P13405 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rb1P13405 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
Rb1P13405 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC15.03■□□□□ -0
Rb1P13405 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
Rb1P13405 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC15.03■□□□□ -0
Rb1P13405 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC15.03■□□□□ -0
Rb1P13405 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rb1P13405 Mir449b-201ENSMUST00000104833 80 ntBASIC15.03■□□□□ -0
Rb1P13405 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rb1P13405 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rb1P13405 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC15.03■□□□□ -0
Rb1P13405 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC15.03■□□□□ -0
Rb1P13405 Gm25948-201ENSMUST00000175334 112 ntBASIC15.03■□□□□ -0
Rb1P13405 Gm20553-201ENSMUST00000204205 844 ntBASIC15.03■□□□□ -0
Rb1P13405 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC15.03■□□□□ -0
Rb1P13405 Wdyhv1-206ENSMUST00000227142 786 ntBASIC15.03■□□□□ -0
Rb1P13405 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC15.03■□□□□ -0
Rb1P13405 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rb1P13405 AC126250.1-201ENSMUST00000228343 1768 ntBASIC15.03■□□□□ -0
Rb1P13405 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rb1P13405 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rb1P13405 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC15.03■□□□□ -0
Rb1P13405 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Rb1P13405 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Rb1P13405 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC15.02■□□□□ -0
Rb1P13405 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC15.02■□□□□ -0
Rb1P13405 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Rb1P13405 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Rb1P13405 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Rb1P13405 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Rb1P13405 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Rb1P13405 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC15.02■□□□□ -0
Rb1P13405 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Rb1P13405 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC15.02■□□□□ -0
Rb1P13405 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC15.02■□□□□ -0
Rb1P13405 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC15.02■□□□□ -0
Rb1P13405 Gm7286-201ENSMUST00000182691 1007 ntBASIC15.02■□□□□ -0
Rb1P13405 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC15.02■□□□□ -0
Rb1P13405 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC15.02■□□□□ -0
Rb1P13405 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Rb1P13405 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
Rb1P13405 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC15.02□□□□□ -0.01
Rb1P13405 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Rb1P13405 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC15.02□□□□□ -0.01
Rb1P13405 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Rb1P13405 Gm44729-201ENSMUST00000206759 2052 ntBASIC15.02□□□□□ -0.01
Rb1P13405 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Rb1P13405 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Rb1P13405 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Rb1P13405 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
Rb1P13405 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC15.02□□□□□ -0.01
Rb1P13405 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC15.02□□□□□ -0.01
Rb1P13405 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Rb1P13405 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
Rb1P13405 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Rb1P13405 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
Rb1P13405 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rb1P13405 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC15.01□□□□□ -0.01
Rb1P13405 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Rb1P13405 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC15.01□□□□□ -0.01
Rb1P13405 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rb1P13405 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rb1P13405 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rb1P13405 Gm13127-201ENSMUST00000118978 1389 ntBASIC15.01□□□□□ -0.01
Rb1P13405 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms