Protein–RNA interactions for Protein: P13297

Msx1, Homeobox protein MSX-1, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx1P13297 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Msx1P13297 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Msx1P13297 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Msx1P13297 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Msx1P13297 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Msx1P13297 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Msx1P13297 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Msx1P13297 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Msx1P13297 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Msx1P13297 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Msx1P13297 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC13.93□□□□□ -0.18
Msx1P13297 Gm43767-201ENSMUST00000198933 381 ntBASIC13.93□□□□□ -0.18
Msx1P13297 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Msx1P13297 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC13.93□□□□□ -0.18
Msx1P13297 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC13.93□□□□□ -0.18
Msx1P13297 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Msx1P13297 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Msx1P13297 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Msx1P13297 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Msx1P13297 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Msx1P13297 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Msx1P13297 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Msx1P13297 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Msx1P13297 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Msx1P13297 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Msx1P13297 AC238940.1-201ENSMUST00000225106 1858 ntBASIC13.93□□□□□ -0.18
Msx1P13297 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Msx1P13297 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Msx1P13297 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC13.93□□□□□ -0.18
Msx1P13297 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Msx1P13297 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Msx1P13297 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Msx1P13297 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Msx1P13297 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Msx1P13297 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Msx1P13297 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Msx1P13297 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Msx1P13297 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Msx1P13297 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC13.92□□□□□ -0.18
Msx1P13297 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Msx1P13297 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Msx1P13297 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Msx1P13297 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Msx1P13297 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Msx1P13297 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Msx1P13297 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Msx1P13297 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Msx1P13297 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Msx1P13297 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Msx1P13297 Gm13823-201ENSMUST00000119930 345 ntBASIC13.92□□□□□ -0.18
Msx1P13297 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Msx1P13297 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC13.92□□□□□ -0.18
Msx1P13297 Gm38230-201ENSMUST00000193572 1159 ntBASIC13.92□□□□□ -0.18
Msx1P13297 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Msx1P13297 Gm2594-201ENSMUST00000214774 742 ntBASIC13.92□□□□□ -0.18
Msx1P13297 AC124408.1-201ENSMUST00000228938 707 ntBASIC13.92□□□□□ -0.18
Msx1P13297 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
Msx1P13297 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Msx1P13297 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Msx1P13297 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Msx1P13297 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Msx1P13297 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC13.92□□□□□ -0.18
Msx1P13297 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Msx1P13297 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Msx1P13297 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Msx1P13297 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Msx1P13297 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Msx1P13297 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
Msx1P13297 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Msx1P13297 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Msx1P13297 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Msx1P13297 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Msx1P13297 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC13.91□□□□□ -0.18
Msx1P13297 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Msx1P13297 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Msx1P13297 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Msx1P13297 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Msx1P13297 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Msx1P13297 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Msx1P13297 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Msx1P13297 Gm13366-201ENSMUST00000122198 970 ntBASIC13.91□□□□□ -0.18
Msx1P13297 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Msx1P13297 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Msx1P13297 2010110E17Rik-201ENSMUST00000184161 879 ntBASIC13.91□□□□□ -0.18
Msx1P13297 Gm5779-201ENSMUST00000218467 910 ntBASIC13.91□□□□□ -0.18
Msx1P13297 CT010486.3-201ENSMUST00000224555 811 ntBASIC13.91□□□□□ -0.18
Msx1P13297 CT025555.1-201ENSMUST00000225901 1217 ntBASIC13.91□□□□□ -0.18
Msx1P13297 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Msx1P13297 Hist1h2al-201ENSMUST00000091708 339 ntBASIC13.91□□□□□ -0.18
Msx1P13297 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Msx1P13297 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Msx1P13297 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Msx1P13297 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Msx1P13297 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC13.91□□□□□ -0.18
Msx1P13297 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Msx1P13297 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC13.91□□□□□ -0.18
Msx1P13297 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Msx1P13297 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Msx1P13297 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Msx1P13297 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms