Protein–RNA interactions for Protein: P0C8K7

Smim1, Small integral membrane protein 1, mousemouse

Predictions only

Length 78 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim1P0C8K7 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC10.1□□□□□ -0.79
Smim1P0C8K7 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Smim1P0C8K7 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Smim1P0C8K7 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.79
Smim1P0C8K7 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC10.1□□□□□ -0.79
Smim1P0C8K7 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.79
Smim1P0C8K7 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC10.1□□□□□ -0.79
Smim1P0C8K7 Gm7002-201ENSMUST00000221386 2165 ntBASIC10.09□□□□□ -0.79
Smim1P0C8K7 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Smim1P0C8K7 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Smim1P0C8K7 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Smim1P0C8K7 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Smim1P0C8K7 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Smim1P0C8K7 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Smim1P0C8K7 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Smim1P0C8K7 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC10.09□□□□□ -0.79
Smim1P0C8K7 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Smim1P0C8K7 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
Smim1P0C8K7 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
Smim1P0C8K7 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC10.09□□□□□ -0.79
Smim1P0C8K7 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Smim1P0C8K7 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Smim1P0C8K7 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Smim1P0C8K7 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Smim1P0C8K7 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Smim1P0C8K7 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC10.09□□□□□ -0.79
Smim1P0C8K7 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Smim1P0C8K7 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Smim1P0C8K7 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Smim1P0C8K7 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Smim1P0C8K7 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Smim1P0C8K7 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
Smim1P0C8K7 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Smim1P0C8K7 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Smim1P0C8K7 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Smim1P0C8K7 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Smim1P0C8K7 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Smim1P0C8K7 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC10.09□□□□□ -0.79
Smim1P0C8K7 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
Smim1P0C8K7 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Smim1P0C8K7 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Smim1P0C8K7 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
Smim1P0C8K7 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Smim1P0C8K7 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Smim1P0C8K7 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Smim1P0C8K7 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC10.08□□□□□ -0.8
Smim1P0C8K7 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Smim1P0C8K7 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC10.08□□□□□ -0.8
Smim1P0C8K7 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Smim1P0C8K7 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
Smim1P0C8K7 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC10.08□□□□□ -0.8
Smim1P0C8K7 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Smim1P0C8K7 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Smim1P0C8K7 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC10.08□□□□□ -0.8
Smim1P0C8K7 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC10.08□□□□□ -0.8
Smim1P0C8K7 AC155729.1-201ENSMUST00000227758 544 ntBASIC10.08□□□□□ -0.8
Smim1P0C8K7 AC114585.2-202ENSMUST00000228094 426 ntBASIC10.08□□□□□ -0.8
Smim1P0C8K7 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Smim1P0C8K7 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Smim1P0C8K7 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Smim1P0C8K7 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Smim1P0C8K7 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Smim1P0C8K7 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Smim1P0C8K7 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Smim1P0C8K7 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Smim1P0C8K7 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Smim1P0C8K7 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Smim1P0C8K7 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
Smim1P0C8K7 AC238940.1-201ENSMUST00000225106 1858 ntBASIC10.08□□□□□ -0.8
Smim1P0C8K7 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Smim1P0C8K7 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Smim1P0C8K7 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Smim1P0C8K7 Gm43677-201ENSMUST00000198098 2378 ntBASIC10.08□□□□□ -0.8
Smim1P0C8K7 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Smim1P0C8K7 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Smim1P0C8K7 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Smim1P0C8K7 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
Smim1P0C8K7 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
Smim1P0C8K7 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Smim1P0C8K7 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Smim1P0C8K7 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Smim1P0C8K7 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC10.07□□□□□ -0.8
Smim1P0C8K7 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC10.07□□□□□ -0.8
Smim1P0C8K7 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC10.07□□□□□ -0.8
Smim1P0C8K7 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
Smim1P0C8K7 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
Smim1P0C8K7 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
Smim1P0C8K7 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
Smim1P0C8K7 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Smim1P0C8K7 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Smim1P0C8K7 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Smim1P0C8K7 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
Smim1P0C8K7 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Smim1P0C8K7 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC10.07□□□□□ -0.8
Smim1P0C8K7 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Smim1P0C8K7 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC10.07□□□□□ -0.8
Smim1P0C8K7 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Smim1P0C8K7 Gm7286-201ENSMUST00000182691 1007 ntBASIC10.07□□□□□ -0.8
Smim1P0C8K7 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Smim1P0C8K7 AC154595.3-201ENSMUST00000224579 384 ntBASIC10.07□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 59.2 ms