Protein–RNA interactions for Protein: P0C6B2

Ptcra, Pre T-cell antigen receptor alpha, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PtcraP0C6B2 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
PtcraP0C6B2 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
PtcraP0C6B2 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
PtcraP0C6B2 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
PtcraP0C6B2 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
PtcraP0C6B2 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC12.74□□□□□ -0.37
PtcraP0C6B2 Gm23547-201ENSMUST00000158210 271 ntBASIC12.74□□□□□ -0.37
PtcraP0C6B2 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC12.74□□□□□ -0.37
PtcraP0C6B2 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
PtcraP0C6B2 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
PtcraP0C6B2 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC12.74□□□□□ -0.37
PtcraP0C6B2 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC12.74□□□□□ -0.37
PtcraP0C6B2 AC155729.1-201ENSMUST00000227758 544 ntBASIC12.74□□□□□ -0.37
PtcraP0C6B2 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
PtcraP0C6B2 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
PtcraP0C6B2 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
PtcraP0C6B2 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
PtcraP0C6B2 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
PtcraP0C6B2 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
PtcraP0C6B2 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
PtcraP0C6B2 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
PtcraP0C6B2 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
PtcraP0C6B2 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
PtcraP0C6B2 Tcf21-202ENSMUST00000218002 1788 ntBASIC12.74□□□□□ -0.37
PtcraP0C6B2 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
PtcraP0C6B2 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
PtcraP0C6B2 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
PtcraP0C6B2 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
PtcraP0C6B2 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
PtcraP0C6B2 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
PtcraP0C6B2 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
PtcraP0C6B2 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
PtcraP0C6B2 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
PtcraP0C6B2 Gm12620-201ENSMUST00000119791 1986 ntBASIC12.73□□□□□ -0.37
PtcraP0C6B2 Gm12612-201ENSMUST00000140182 1986 ntBASIC12.73□□□□□ -0.37
PtcraP0C6B2 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
PtcraP0C6B2 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
PtcraP0C6B2 Gm4913-201ENSMUST00000117075 1290 ntBASIC12.73□□□□□ -0.37
PtcraP0C6B2 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC12.73□□□□□ -0.37
PtcraP0C6B2 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC12.73□□□□□ -0.37
PtcraP0C6B2 Gm18057-201ENSMUST00000208220 503 ntBASIC12.73□□□□□ -0.37
PtcraP0C6B2 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
PtcraP0C6B2 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
PtcraP0C6B2 Gm42632-201ENSMUST00000201707 2411 ntBASIC12.73□□□□□ -0.37
PtcraP0C6B2 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC12.73□□□□□ -0.37
PtcraP0C6B2 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
PtcraP0C6B2 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
PtcraP0C6B2 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC12.73□□□□□ -0.37
PtcraP0C6B2 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
PtcraP0C6B2 Gm44645-201ENSMUST00000205492 1653 ntBASIC12.73□□□□□ -0.37
PtcraP0C6B2 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
PtcraP0C6B2 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
PtcraP0C6B2 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
PtcraP0C6B2 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
PtcraP0C6B2 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
PtcraP0C6B2 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC12.72□□□□□ -0.37
PtcraP0C6B2 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
PtcraP0C6B2 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC12.72□□□□□ -0.37
PtcraP0C6B2 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
PtcraP0C6B2 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
PtcraP0C6B2 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC12.72□□□□□ -0.37
PtcraP0C6B2 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC12.72□□□□□ -0.37
PtcraP0C6B2 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC12.72□□□□□ -0.37
PtcraP0C6B2 Gm15483-201ENSMUST00000120338 456 ntBASIC12.72□□□□□ -0.37
PtcraP0C6B2 Gm12017-201ENSMUST00000122453 1003 ntBASIC12.72□□□□□ -0.37
PtcraP0C6B2 Mir1895-201ENSMUST00000122615 79 ntBASIC12.72□□□□□ -0.37
PtcraP0C6B2 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC12.72□□□□□ -0.37
PtcraP0C6B2 Gm27920-201ENSMUST00000183953 96 ntBASIC12.72□□□□□ -0.37
PtcraP0C6B2 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC12.72□□□□□ -0.37
PtcraP0C6B2 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC12.72□□□□□ -0.37
PtcraP0C6B2 AC153937.1-201ENSMUST00000218734 412 ntBASIC12.72□□□□□ -0.37
PtcraP0C6B2 Gm5628-201ENSMUST00000222318 1049 ntBASIC12.72□□□□□ -0.37
PtcraP0C6B2 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
PtcraP0C6B2 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
PtcraP0C6B2 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
PtcraP0C6B2 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
PtcraP0C6B2 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
PtcraP0C6B2 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC12.72□□□□□ -0.37
PtcraP0C6B2 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
PtcraP0C6B2 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
PtcraP0C6B2 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
PtcraP0C6B2 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
PtcraP0C6B2 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC12.72□□□□□ -0.37
PtcraP0C6B2 Gm37305-201ENSMUST00000195714 4279 ntBASIC12.72□□□□□ -0.37
PtcraP0C6B2 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
PtcraP0C6B2 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
PtcraP0C6B2 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
PtcraP0C6B2 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
PtcraP0C6B2 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
PtcraP0C6B2 Carlr-201ENSMUST00000181515 2574 ntBASIC12.72□□□□□ -0.37
PtcraP0C6B2 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
PtcraP0C6B2 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
PtcraP0C6B2 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC12.71□□□□□ -0.37
PtcraP0C6B2 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
PtcraP0C6B2 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
PtcraP0C6B2 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
PtcraP0C6B2 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC12.71□□□□□ -0.37
PtcraP0C6B2 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC12.71□□□□□ -0.37
PtcraP0C6B2 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.37
PtcraP0C6B2 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC12.71□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms