Protein–RNA interactions for Protein: P06320

T-cell receptor beta chain V region CTL-F3, mousemouse

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06320 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.92
P06320 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC9.27□□□□□ -0.93
P06320 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC9.27□□□□□ -0.93
P06320 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
P06320 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC9.27□□□□□ -0.93
P06320 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC9.27□□□□□ -0.93
P06320 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
P06320 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.93
P06320 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC9.27□□□□□ -0.93
P06320 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
P06320 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC9.27□□□□□ -0.93
P06320 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
P06320 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC9.27□□□□□ -0.93
P06320 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
P06320 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
P06320 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
P06320 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
P06320 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
P06320 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
P06320 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
P06320 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
P06320 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
P06320 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
P06320 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.93
P06320 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.93
P06320 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC9.27□□□□□ -0.93
P06320 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
P06320 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC9.27□□□□□ -0.93
P06320 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC9.27□□□□□ -0.93
P06320 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.93
P06320 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC9.27□□□□□ -0.93
P06320 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
P06320 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
P06320 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC9.27□□□□□ -0.93
P06320 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.93
P06320 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
P06320 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC9.27□□□□□ -0.93
P06320 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
P06320 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.93
P06320 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
P06320 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
P06320 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
P06320 Carlr-201ENSMUST00000181515 2574 ntBASIC9.26□□□□□ -0.93
P06320 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
P06320 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC9.26□□□□□ -0.93
P06320 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC9.26□□□□□ -0.93
P06320 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
P06320 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC9.26□□□□□ -0.93
P06320 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
P06320 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC9.26□□□□□ -0.93
P06320 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
P06320 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
P06320 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
P06320 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
P06320 Gm4609-201ENSMUST00000106443 1002 ntBASIC9.26□□□□□ -0.93
P06320 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
P06320 Gm5138-201ENSMUST00000113842 1002 ntBASIC9.26□□□□□ -0.93
P06320 Gm12008-201ENSMUST00000117791 755 ntBASIC9.26□□□□□ -0.93
P06320 Gm15191-201ENSMUST00000117933 1000 ntBASIC9.26□□□□□ -0.93
P06320 Gm12182-201ENSMUST00000118655 1008 ntBASIC9.26□□□□□ -0.93
P06320 Gm13882-201ENSMUST00000120886 1002 ntBASIC9.26□□□□□ -0.93
P06320 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC9.26□□□□□ -0.93
P06320 Gm10284-201ENSMUST00000145057 1005 ntBASIC9.26□□□□□ -0.93
P06320 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC9.26□□□□□ -0.93
P06320 Gm10481-201ENSMUST00000179228 1002 ntBASIC9.26□□□□□ -0.93
P06320 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC9.26□□□□□ -0.93
P06320 Gm2574-201ENSMUST00000181051 1002 ntBASIC9.26□□□□□ -0.93
P06320 Gm3200-201ENSMUST00000181493 1002 ntBASIC9.26□□□□□ -0.93
P06320 Gm8825-201ENSMUST00000182565 998 ntBASIC9.26□□□□□ -0.93
P06320 Gm4518-201ENSMUST00000182638 718 ntBASIC9.26□□□□□ -0.93
P06320 Gm8330-201ENSMUST00000182754 1008 ntBASIC9.26□□□□□ -0.93
P06320 Gm4575-201ENSMUST00000182991 1002 ntBASIC9.26□□□□□ -0.93
P06320 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC9.26□□□□□ -0.93
P06320 Gm8709-201ENSMUST00000183230 1012 ntBASIC9.26□□□□□ -0.93
P06320 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC9.26□□□□□ -0.93
P06320 Gm21559-201ENSMUST00000220638 855 ntBASIC9.26□□□□□ -0.93
P06320 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
P06320 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC9.26□□□□□ -0.93
P06320 Gm10293-201ENSMUST00000076317 1002 ntBASIC9.26□□□□□ -0.93
P06320 Gm8587-201ENSMUST00000076538 843 ntBASIC9.26□□□□□ -0.93
P06320 Gm6316-201ENSMUST00000082064 1020 ntBASIC9.26□□□□□ -0.93
P06320 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC9.26□□□□□ -0.93
P06320 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC9.26□□□□□ -0.93
P06320 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC9.26□□□□□ -0.93
P06320 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
P06320 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC9.26□□□□□ -0.93
P06320 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
P06320 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
P06320 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
P06320 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC9.26□□□□□ -0.93
P06320 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC9.26□□□□□ -0.93
P06320 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
P06320 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
P06320 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC9.26□□□□□ -0.93
P06320 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC9.26□□□□□ -0.93
P06320 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
P06320 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
P06320 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
P06320 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
P06320 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Retrieved 100 of 76,532 protein–RNA pairs in 51.6 ms