Protein–RNA interactions for Protein: P04213

T-cell receptor beta chain V region C5 (Fragment), mousemouse

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04213 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
P04213 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
P04213 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
P04213 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
P04213 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
P04213 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
P04213 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
P04213 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
P04213 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
P04213 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
P04213 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
P04213 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
P04213 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
P04213 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
P04213 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC14.07□□□□□ -0.16
P04213 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
P04213 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
P04213 Gm14140-201ENSMUST00000119999 995 ntBASIC14.07□□□□□ -0.16
P04213 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC14.07□□□□□ -0.16
P04213 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC14.07□□□□□ -0.16
P04213 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
P04213 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC14.07□□□□□ -0.16
P04213 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC14.07□□□□□ -0.16
P04213 Thap2-203ENSMUST00000218989 527 ntBASIC14.07□□□□□ -0.16
P04213 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
P04213 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
P04213 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
P04213 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC14.07□□□□□ -0.16
P04213 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC14.07□□□□□ -0.16
P04213 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
P04213 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
P04213 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC14.07□□□□□ -0.16
P04213 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
P04213 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
P04213 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
P04213 Gm8096-201ENSMUST00000209921 1591 ntBASIC14.06□□□□□ -0.16
P04213 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC14.06□□□□□ -0.16
P04213 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC14.06□□□□□ -0.16
P04213 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC14.06□□□□□ -0.16
P04213 Gm18733-201ENSMUST00000173950 856 ntBASIC14.06□□□□□ -0.16
P04213 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC14.06□□□□□ -0.16
P04213 Gm27301-201ENSMUST00000184012 127 ntBASIC14.06□□□□□ -0.16
P04213 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC14.06□□□□□ -0.16
P04213 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC14.06□□□□□ -0.16
P04213 Olfr286-202ENSMUST00000205305 969 ntBASIC14.06□□□□□ -0.16
P04213 Gm7229-201ENSMUST00000214719 1007 ntBASIC14.06□□□□□ -0.16
P04213 Psmb5-202ENSMUST00000227257 622 ntBASIC14.06□□□□□ -0.16
P04213 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
P04213 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
P04213 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
P04213 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
P04213 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
P04213 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
P04213 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
P04213 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
P04213 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
P04213 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
P04213 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
P04213 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
P04213 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
P04213 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
P04213 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
P04213 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
P04213 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
P04213 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
P04213 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
P04213 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC14.05□□□□□ -0.16
P04213 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
P04213 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
P04213 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
P04213 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
P04213 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
P04213 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
P04213 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
P04213 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
P04213 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
P04213 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC14.05□□□□□ -0.16
P04213 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
P04213 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
P04213 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
P04213 Gm14451-201ENSMUST00000121581 1542 ntBASIC14.05□□□□□ -0.16
P04213 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC14.05□□□□□ -0.16
P04213 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
P04213 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
P04213 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
P04213 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
P04213 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
P04213 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
P04213 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
P04213 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
P04213 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
P04213 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
P04213 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
P04213 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
P04213 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
P04213 Gm21451-201ENSMUST00000111062 2775 ntBASIC14.04□□□□□ -0.16
P04213 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC14.04□□□□□ -0.16
P04213 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
P04213 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
P04213 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms