Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
TcraP01849 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC10.73□□□□□ -0.69
TcraP01849 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
TcraP01849 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
TcraP01849 Gm11860-201ENSMUST00000122346 1010 ntBASIC10.73□□□□□ -0.69
TcraP01849 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC10.73□□□□□ -0.69
TcraP01849 Gm6623-201ENSMUST00000173570 544 ntBASIC10.73□□□□□ -0.69
TcraP01849 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC10.73□□□□□ -0.69
TcraP01849 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
TcraP01849 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
TcraP01849 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
TcraP01849 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
TcraP01849 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
TcraP01849 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
TcraP01849 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
TcraP01849 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
TcraP01849 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
TcraP01849 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
TcraP01849 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC10.73□□□□□ -0.69
TcraP01849 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
TcraP01849 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
TcraP01849 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
TcraP01849 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
TcraP01849 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
TcraP01849 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC10.73□□□□□ -0.69
TcraP01849 Gm8242-201ENSMUST00000193029 1420 ntBASIC10.73□□□□□ -0.69
TcraP01849 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
TcraP01849 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
TcraP01849 AC166491.1-201ENSMUST00000227053 2308 ntBASIC10.73□□□□□ -0.69
TcraP01849 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
TcraP01849 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC10.73□□□□□ -0.69
TcraP01849 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
TcraP01849 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC10.73□□□□□ -0.69
TcraP01849 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
TcraP01849 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC10.73□□□□□ -0.69
TcraP01849 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
TcraP01849 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
TcraP01849 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
TcraP01849 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
TcraP01849 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC10.72□□□□□ -0.69
TcraP01849 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
TcraP01849 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
TcraP01849 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
TcraP01849 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
TcraP01849 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
TcraP01849 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
TcraP01849 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC10.72□□□□□ -0.69
TcraP01849 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC10.72□□□□□ -0.69
TcraP01849 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
TcraP01849 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
TcraP01849 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
TcraP01849 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
TcraP01849 Mir770-201ENSMUST00000103252 94 ntBASIC10.72□□□□□ -0.69
TcraP01849 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
TcraP01849 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
TcraP01849 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
TcraP01849 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
TcraP01849 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC10.72□□□□□ -0.69
TcraP01849 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC10.72□□□□□ -0.69
TcraP01849 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
TcraP01849 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC10.72□□□□□ -0.69
TcraP01849 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
TcraP01849 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC10.72□□□□□ -0.69
TcraP01849 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC10.72□□□□□ -0.69
TcraP01849 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
TcraP01849 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
TcraP01849 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
TcraP01849 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
TcraP01849 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
TcraP01849 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
TcraP01849 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
TcraP01849 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
TcraP01849 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
TcraP01849 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC10.72□□□□□ -0.69
TcraP01849 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
TcraP01849 Gm44645-201ENSMUST00000205492 1653 ntBASIC10.72□□□□□ -0.69
TcraP01849 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
TcraP01849 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
TcraP01849 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
TcraP01849 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
TcraP01849 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
TcraP01849 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
TcraP01849 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
TcraP01849 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
TcraP01849 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
TcraP01849 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
TcraP01849 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
TcraP01849 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
TcraP01849 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
TcraP01849 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
TcraP01849 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
TcraP01849 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
TcraP01849 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
TcraP01849 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC10.71□□□□□ -0.69
TcraP01849 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC10.71□□□□□ -0.69
TcraP01849 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
TcraP01849 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
TcraP01849 Mir7071-201ENSMUST00000184847 69 ntBASIC10.71□□□□□ -0.69
TcraP01849 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
TcraP01849 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms