Protein–RNA interactions for Protein: O89116

Vti1a, Vesicle transport through interaction with t-SNAREs homolog 1A, mousemouse

Predictions only

Length 217 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1aO89116 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vti1aO89116 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC15.81■□□□□ 0.12
Vti1aO89116 Gm9824-201ENSMUST00000178707 561 ntBASIC15.81■□□□□ 0.12
Vti1aO89116 Gm11960-202ENSMUST00000181063 2858 ntBASIC15.81■□□□□ 0.12
Vti1aO89116 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Vti1aO89116 Gm37277-201ENSMUST00000194052 1111 ntBASIC15.81■□□□□ 0.12
Vti1aO89116 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Vti1aO89116 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC15.81■□□□□ 0.12
Vti1aO89116 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Vti1aO89116 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vti1aO89116 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vti1aO89116 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vti1aO89116 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vti1aO89116 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Vti1aO89116 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vti1aO89116 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vti1aO89116 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vti1aO89116 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vti1aO89116 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vti1aO89116 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Vti1aO89116 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vti1aO89116 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vti1aO89116 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Vti1aO89116 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vti1aO89116 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vti1aO89116 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vti1aO89116 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vti1aO89116 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vti1aO89116 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vti1aO89116 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vti1aO89116 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC15.8■□□□□ 0.12
Vti1aO89116 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC15.8■□□□□ 0.12
Vti1aO89116 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vti1aO89116 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Vti1aO89116 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vti1aO89116 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC15.8■□□□□ 0.12
Vti1aO89116 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Vti1aO89116 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Vti1aO89116 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Vti1aO89116 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC15.8■□□□□ 0.12
Vti1aO89116 Gm2810-201ENSMUST00000118681 990 ntBASIC15.8■□□□□ 0.12
Vti1aO89116 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC15.8■□□□□ 0.12
Vti1aO89116 CT009510.1-201ENSMUST00000227972 270 ntBASIC15.8■□□□□ 0.12
Vti1aO89116 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vti1aO89116 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vti1aO89116 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vti1aO89116 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vti1aO89116 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
Vti1aO89116 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vti1aO89116 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vti1aO89116 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC15.8■□□□□ 0.12
Vti1aO89116 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Vti1aO89116 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vti1aO89116 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Vti1aO89116 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vti1aO89116 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vti1aO89116 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC15.79■□□□□ 0.12
Vti1aO89116 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Vti1aO89116 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Vti1aO89116 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Vti1aO89116 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Vti1aO89116 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Vti1aO89116 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Vti1aO89116 Gm8242-201ENSMUST00000193029 1420 ntBASIC15.79■□□□□ 0.12
Vti1aO89116 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC15.79■□□□□ 0.12
Vti1aO89116 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Vti1aO89116 Gm29340-201ENSMUST00000188763 3854 ntBASIC15.79■□□□□ 0.12
Vti1aO89116 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Vti1aO89116 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Vti1aO89116 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC15.79■□□□□ 0.12
Vti1aO89116 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC15.79■□□□□ 0.12
Vti1aO89116 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC15.79■□□□□ 0.12
Vti1aO89116 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC15.79■□□□□ 0.12
Vti1aO89116 Gm15483-201ENSMUST00000120338 456 ntBASIC15.79■□□□□ 0.12
Vti1aO89116 Gm12151-201ENSMUST00000121374 290 ntBASIC15.79■□□□□ 0.12
Vti1aO89116 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC15.79■□□□□ 0.12
Vti1aO89116 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC15.79■□□□□ 0.12
Vti1aO89116 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC15.79■□□□□ 0.12
Vti1aO89116 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC15.79■□□□□ 0.12
Vti1aO89116 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Vti1aO89116 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Vti1aO89116 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Vti1aO89116 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Vti1aO89116 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Vti1aO89116 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Vti1aO89116 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Vti1aO89116 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC15.78■□□□□ 0.12
Vti1aO89116 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC15.78■□□□□ 0.12
Vti1aO89116 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Vti1aO89116 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC15.78■□□□□ 0.12
Vti1aO89116 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Vti1aO89116 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Vti1aO89116 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Vti1aO89116 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Vti1aO89116 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Vti1aO89116 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
Vti1aO89116 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC15.78■□□□□ 0.12
Vti1aO89116 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC15.78■□□□□ 0.12
Vti1aO89116 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Vti1aO89116 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms