Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
CopeO89079 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CopeO89079 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CopeO89079 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CopeO89079 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CopeO89079 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CopeO89079 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
CopeO89079 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC15.15■□□□□ 0.02
CopeO89079 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CopeO89079 Gm17807-201ENSMUST00000186869 298 ntBASIC15.15■□□□□ 0.02
CopeO89079 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC15.15■□□□□ 0.02
CopeO89079 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC15.15■□□□□ 0.02
CopeO89079 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CopeO89079 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
CopeO89079 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
CopeO89079 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
CopeO89079 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC15.15■□□□□ 0.02
CopeO89079 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CopeO89079 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CopeO89079 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
CopeO89079 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CopeO89079 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CopeO89079 Gm3928-201ENSMUST00000121141 1307 ntBASIC15.15■□□□□ 0.02
CopeO89079 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.02
CopeO89079 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CopeO89079 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CopeO89079 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CopeO89079 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CopeO89079 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CopeO89079 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CopeO89079 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CopeO89079 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC15.14■□□□□ 0.01
CopeO89079 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CopeO89079 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CopeO89079 Trav13-3-201ENSMUST00000117226 336 ntBASIC15.14■□□□□ 0.01
CopeO89079 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC15.14■□□□□ 0.01
CopeO89079 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CopeO89079 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
CopeO89079 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC15.14■□□□□ 0.01
CopeO89079 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CopeO89079 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CopeO89079 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CopeO89079 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC15.14■□□□□ 0.01
CopeO89079 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CopeO89079 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CopeO89079 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC15.14■□□□□ 0.01
CopeO89079 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CopeO89079 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CopeO89079 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CopeO89079 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CopeO89079 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CopeO89079 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CopeO89079 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
CopeO89079 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CopeO89079 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CopeO89079 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CopeO89079 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CopeO89079 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CopeO89079 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CopeO89079 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CopeO89079 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
CopeO89079 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
CopeO89079 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CopeO89079 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC15.13■□□□□ 0.01
CopeO89079 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CopeO89079 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CopeO89079 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
CopeO89079 Gm13418-201ENSMUST00000119097 944 ntBASIC15.13■□□□□ 0.01
CopeO89079 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC15.13■□□□□ 0.01
CopeO89079 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CopeO89079 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CopeO89079 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC15.13■□□□□ 0.01
CopeO89079 AC159301.1-201ENSMUST00000225130 1182 ntBASIC15.13■□□□□ 0.01
CopeO89079 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CopeO89079 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
CopeO89079 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CopeO89079 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC15.13■□□□□ 0.01
CopeO89079 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CopeO89079 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CopeO89079 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
CopeO89079 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CopeO89079 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CopeO89079 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CopeO89079 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
CopeO89079 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
CopeO89079 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CopeO89079 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CopeO89079 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CopeO89079 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC15.12■□□□□ 0.01
CopeO89079 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CopeO89079 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CopeO89079 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC15.12■□□□□ 0.01
CopeO89079 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CopeO89079 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CopeO89079 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CopeO89079 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
CopeO89079 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC15.12■□□□□ 0.01
CopeO89079 Gm7787-201ENSMUST00000216858 688 ntBASIC15.12■□□□□ 0.01
CopeO89079 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CopeO89079 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms