Protein–RNA interactions for Protein: O89016

Abcd4, ATP-binding cassette sub-family D member 4, mousemouse

Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcd4O89016 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Abcd4O89016 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC13.3□□□□□ -0.28
Abcd4O89016 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Abcd4O89016 Gm45504-201ENSMUST00000211407 2107 ntBASIC13.3□□□□□ -0.28
Abcd4O89016 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Abcd4O89016 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Abcd4O89016 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Abcd4O89016 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Abcd4O89016 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Abcd4O89016 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC13.3□□□□□ -0.28
Abcd4O89016 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC13.3□□□□□ -0.28
Abcd4O89016 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC13.3□□□□□ -0.28
Abcd4O89016 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Abcd4O89016 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC13.3□□□□□ -0.28
Abcd4O89016 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Abcd4O89016 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Abcd4O89016 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Abcd4O89016 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Abcd4O89016 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Abcd4O89016 AC130669.1-201ENSMUST00000228537 1672 ntBASIC13.3□□□□□ -0.28
Abcd4O89016 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Abcd4O89016 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Abcd4O89016 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Abcd4O89016 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Abcd4O89016 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Abcd4O89016 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC13.29□□□□□ -0.28
Abcd4O89016 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Abcd4O89016 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Abcd4O89016 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Abcd4O89016 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC13.29□□□□□ -0.28
Abcd4O89016 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
Abcd4O89016 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Abcd4O89016 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Abcd4O89016 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Abcd4O89016 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Abcd4O89016 Gm9385-201ENSMUST00000117563 472 ntBASIC13.29□□□□□ -0.28
Abcd4O89016 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC13.29□□□□□ -0.28
Abcd4O89016 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Abcd4O89016 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Abcd4O89016 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC13.29□□□□□ -0.28
Abcd4O89016 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Abcd4O89016 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC13.29□□□□□ -0.28
Abcd4O89016 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Abcd4O89016 Gm43474-201ENSMUST00000196415 774 ntBASIC13.29□□□□□ -0.28
Abcd4O89016 Gm18057-201ENSMUST00000208220 503 ntBASIC13.29□□□□□ -0.28
Abcd4O89016 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Abcd4O89016 CT025555.1-201ENSMUST00000225901 1217 ntBASIC13.29□□□□□ -0.28
Abcd4O89016 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Abcd4O89016 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Abcd4O89016 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Abcd4O89016 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Abcd4O89016 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC13.29□□□□□ -0.28
Abcd4O89016 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Abcd4O89016 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC13.29□□□□□ -0.28
Abcd4O89016 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Abcd4O89016 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Abcd4O89016 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Abcd4O89016 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Abcd4O89016 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC13.29□□□□□ -0.28
Abcd4O89016 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Abcd4O89016 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Abcd4O89016 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Abcd4O89016 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Abcd4O89016 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC13.29□□□□□ -0.28
Abcd4O89016 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Abcd4O89016 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Abcd4O89016 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
Abcd4O89016 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Abcd4O89016 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Abcd4O89016 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Abcd4O89016 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Abcd4O89016 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Abcd4O89016 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Abcd4O89016 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Abcd4O89016 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Abcd4O89016 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Abcd4O89016 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC13.28□□□□□ -0.28
Abcd4O89016 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Abcd4O89016 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Abcd4O89016 Gm14057-201ENSMUST00000120631 482 ntBASIC13.28□□□□□ -0.28
Abcd4O89016 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC13.28□□□□□ -0.28
Abcd4O89016 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC13.28□□□□□ -0.28
Abcd4O89016 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Abcd4O89016 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC13.28□□□□□ -0.28
Abcd4O89016 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC13.28□□□□□ -0.28
Abcd4O89016 AC139382.1-201ENSMUST00000221402 498 ntBASIC13.28□□□□□ -0.28
Abcd4O89016 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Abcd4O89016 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Abcd4O89016 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC13.28□□□□□ -0.28
Abcd4O89016 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Abcd4O89016 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Abcd4O89016 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Abcd4O89016 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Abcd4O89016 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Abcd4O89016 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC13.28□□□□□ -0.28
Abcd4O89016 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Abcd4O89016 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Abcd4O89016 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
Abcd4O89016 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Abcd4O89016 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 97.7 ms