Protein–RNA interactions for Protein: O88895

Hdac3, Histone deacetylase 3, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac3O88895 AC121805.2-201ENSMUST00000218808 2538 ntBASIC13.15□□□□□ -0.3
Hdac3O88895 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hdac3O88895 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC13.15□□□□□ -0.3
Hdac3O88895 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hdac3O88895 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC13.15□□□□□ -0.3
Hdac3O88895 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC13.15□□□□□ -0.3
Hdac3O88895 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC13.15□□□□□ -0.3
Hdac3O88895 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hdac3O88895 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Hdac3O88895 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hdac3O88895 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hdac3O88895 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hdac3O88895 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Hdac3O88895 Gm13036-201ENSMUST00000117799 748 ntBASIC13.15□□□□□ -0.3
Hdac3O88895 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Hdac3O88895 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC13.15□□□□□ -0.3
Hdac3O88895 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Hdac3O88895 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hdac3O88895 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC13.15□□□□□ -0.3
Hdac3O88895 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hdac3O88895 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC13.15□□□□□ -0.3
Hdac3O88895 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hdac3O88895 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Hdac3O88895 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hdac3O88895 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Hdac3O88895 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Hdac3O88895 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hdac3O88895 Gm14780-201ENSMUST00000118387 2737 ntBASIC13.15□□□□□ -0.3
Hdac3O88895 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hdac3O88895 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hdac3O88895 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hdac3O88895 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC13.15□□□□□ -0.3
Hdac3O88895 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hdac3O88895 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Hdac3O88895 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Hdac3O88895 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hdac3O88895 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hdac3O88895 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hdac3O88895 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hdac3O88895 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Hdac3O88895 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hdac3O88895 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hdac3O88895 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hdac3O88895 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hdac3O88895 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
Hdac3O88895 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC13.14□□□□□ -0.31
Hdac3O88895 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hdac3O88895 Gm18733-201ENSMUST00000173950 856 ntBASIC13.14□□□□□ -0.31
Hdac3O88895 Mir5126-201ENSMUST00000175513 77 ntBASIC13.14□□□□□ -0.31
Hdac3O88895 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hdac3O88895 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hdac3O88895 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
Hdac3O88895 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hdac3O88895 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC13.14□□□□□ -0.31
Hdac3O88895 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hdac3O88895 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
Hdac3O88895 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hdac3O88895 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hdac3O88895 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hdac3O88895 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hdac3O88895 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hdac3O88895 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hdac3O88895 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC13.13□□□□□ -0.31
Hdac3O88895 Gm5366-201ENSMUST00000215494 1338 ntBASIC13.13□□□□□ -0.31
Hdac3O88895 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hdac3O88895 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Hdac3O88895 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hdac3O88895 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hdac3O88895 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Hdac3O88895 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Hdac3O88895 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hdac3O88895 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hdac3O88895 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hdac3O88895 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hdac3O88895 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hdac3O88895 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hdac3O88895 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hdac3O88895 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Hdac3O88895 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hdac3O88895 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hdac3O88895 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hdac3O88895 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hdac3O88895 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hdac3O88895 Gm6184-201ENSMUST00000120403 1261 ntBASIC13.13□□□□□ -0.31
Hdac3O88895 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hdac3O88895 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC13.13□□□□□ -0.31
Hdac3O88895 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC13.13□□□□□ -0.31
Hdac3O88895 AC084391.1-201ENSMUST00000200651 141 ntBASIC13.13□□□□□ -0.31
Hdac3O88895 Gm42670-201ENSMUST00000201816 1292 ntBASIC13.13□□□□□ -0.31
Hdac3O88895 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hdac3O88895 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hdac3O88895 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hdac3O88895 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hdac3O88895 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hdac3O88895 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC13.13□□□□□ -0.31
Hdac3O88895 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC13.13□□□□□ -0.31
Hdac3O88895 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hdac3O88895 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hdac3O88895 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hdac3O88895 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms