Protein–RNA interactions for Protein: O88705

Hcn3, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn3O88705 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hcn3O88705 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hcn3O88705 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Hcn3O88705 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC14.06□□□□□ -0.16
Hcn3O88705 Gm8344-201ENSMUST00000119813 856 ntBASIC14.06□□□□□ -0.16
Hcn3O88705 Gm17971-201ENSMUST00000190239 806 ntBASIC14.06□□□□□ -0.16
Hcn3O88705 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC14.06□□□□□ -0.16
Hcn3O88705 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC14.06□□□□□ -0.16
Hcn3O88705 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hcn3O88705 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC14.06□□□□□ -0.16
Hcn3O88705 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hcn3O88705 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hcn3O88705 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hcn3O88705 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Hcn3O88705 AC126250.1-201ENSMUST00000228343 1768 ntBASIC14.06□□□□□ -0.16
Hcn3O88705 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hcn3O88705 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hcn3O88705 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hcn3O88705 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hcn3O88705 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hcn3O88705 Gm45293-201ENSMUST00000209754 1812 ntBASIC14.06□□□□□ -0.16
Hcn3O88705 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hcn3O88705 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hcn3O88705 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC14.05□□□□□ -0.16
Hcn3O88705 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC14.05□□□□□ -0.16
Hcn3O88705 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hcn3O88705 Gm11405-201ENSMUST00000118689 1556 ntBASIC14.05□□□□□ -0.16
Hcn3O88705 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Hcn3O88705 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hcn3O88705 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hcn3O88705 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hcn3O88705 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hcn3O88705 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hcn3O88705 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hcn3O88705 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hcn3O88705 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hcn3O88705 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
Hcn3O88705 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hcn3O88705 Gm4081-201ENSMUST00000195287 1838 ntBASIC14.05□□□□□ -0.16
Hcn3O88705 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Hcn3O88705 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hcn3O88705 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hcn3O88705 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hcn3O88705 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hcn3O88705 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Hcn3O88705 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC14.05□□□□□ -0.16
Hcn3O88705 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Hcn3O88705 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Hcn3O88705 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hcn3O88705 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hcn3O88705 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hcn3O88705 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hcn3O88705 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hcn3O88705 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hcn3O88705 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Hcn3O88705 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hcn3O88705 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Hcn3O88705 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Hcn3O88705 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hcn3O88705 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hcn3O88705 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Hcn3O88705 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Hcn3O88705 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC14.04□□□□□ -0.16
Hcn3O88705 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Hcn3O88705 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Hcn3O88705 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC14.04□□□□□ -0.16
Hcn3O88705 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC14.04□□□□□ -0.16
Hcn3O88705 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC14.04□□□□□ -0.16
Hcn3O88705 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hcn3O88705 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hcn3O88705 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hcn3O88705 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC14.04□□□□□ -0.16
Hcn3O88705 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Hcn3O88705 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hcn3O88705 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Hcn3O88705 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hcn3O88705 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Hcn3O88705 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC14.04□□□□□ -0.16
Hcn3O88705 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC14.04□□□□□ -0.16
Hcn3O88705 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hcn3O88705 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hcn3O88705 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hcn3O88705 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hcn3O88705 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hcn3O88705 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hcn3O88705 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hcn3O88705 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Hcn3O88705 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Hcn3O88705 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hcn3O88705 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hcn3O88705 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hcn3O88705 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hcn3O88705 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hcn3O88705 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Hcn3O88705 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC14.03□□□□□ -0.16
Hcn3O88705 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hcn3O88705 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hcn3O88705 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hcn3O88705 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC14.03□□□□□ -0.16
Hcn3O88705 Gm34391-201ENSMUST00000203706 907 ntBASIC14.03□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 72.2 ms