Protein–RNA interactions for Protein: O88544

Cops4, COP9 signalosome complex subunit 4, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops4O88544 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Cops4O88544 Ksr1-207ENSMUST00000226282 5260 ntBASIC13.57□□□□□ -0.24
Cops4O88544 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Cops4O88544 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cops4O88544 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cops4O88544 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cops4O88544 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC13.57□□□□□ -0.24
Cops4O88544 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
Cops4O88544 Gm27357-201ENSMUST00000183754 135 ntBASIC13.57□□□□□ -0.24
Cops4O88544 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC13.57□□□□□ -0.24
Cops4O88544 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC13.57□□□□□ -0.24
Cops4O88544 AC153889.1-201ENSMUST00000219257 330 ntBASIC13.57□□□□□ -0.24
Cops4O88544 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cops4O88544 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cops4O88544 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cops4O88544 Gm10313-201ENSMUST00000095320 1002 ntBASIC13.57□□□□□ -0.24
Cops4O88544 Mxra8os-201ENSMUST00000097740 687 ntBASIC13.57□□□□□ -0.24
Cops4O88544 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cops4O88544 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC13.57□□□□□ -0.24
Cops4O88544 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cops4O88544 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cops4O88544 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Cops4O88544 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Cops4O88544 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC13.57□□□□□ -0.24
Cops4O88544 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cops4O88544 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Cops4O88544 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cops4O88544 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC13.57□□□□□ -0.24
Cops4O88544 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Cops4O88544 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Cops4O88544 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cops4O88544 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cops4O88544 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cops4O88544 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cops4O88544 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cops4O88544 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cops4O88544 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cops4O88544 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cops4O88544 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Cops4O88544 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cops4O88544 Gm7935-201ENSMUST00000100555 1278 ntBASIC13.56□□□□□ -0.24
Cops4O88544 Gm4459-201ENSMUST00000118750 468 ntBASIC13.56□□□□□ -0.24
Cops4O88544 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cops4O88544 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC13.56□□□□□ -0.24
Cops4O88544 Cmtm5-203ENSMUST00000227441 610 ntBASIC13.56□□□□□ -0.24
Cops4O88544 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cops4O88544 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cops4O88544 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cops4O88544 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cops4O88544 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cops4O88544 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Cops4O88544 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cops4O88544 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cops4O88544 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Cops4O88544 Gm43056-201ENSMUST00000197865 2791 ntBASIC13.56□□□□□ -0.24
Cops4O88544 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cops4O88544 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cops4O88544 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cops4O88544 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cops4O88544 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Cops4O88544 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cops4O88544 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Cops4O88544 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Cops4O88544 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cops4O88544 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cops4O88544 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cops4O88544 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cops4O88544 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Cops4O88544 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cops4O88544 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cops4O88544 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC13.55□□□□□ -0.24
Cops4O88544 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cops4O88544 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cops4O88544 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cops4O88544 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cops4O88544 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cops4O88544 Gm8344-201ENSMUST00000119813 856 ntBASIC13.55□□□□□ -0.24
Cops4O88544 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cops4O88544 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Cops4O88544 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cops4O88544 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
Cops4O88544 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC13.55□□□□□ -0.24
Cops4O88544 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Cops4O88544 Gm7506-201ENSMUST00000207758 815 ntBASIC13.55□□□□□ -0.24
Cops4O88544 Gm18622-201ENSMUST00000219361 595 ntBASIC13.55□□□□□ -0.24
Cops4O88544 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC13.55□□□□□ -0.24
Cops4O88544 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC13.55□□□□□ -0.24
Cops4O88544 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cops4O88544 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cops4O88544 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cops4O88544 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cops4O88544 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cops4O88544 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cops4O88544 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cops4O88544 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Cops4O88544 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cops4O88544 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cops4O88544 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cops4O88544 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cops4O88544 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC13.55□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms