Protein–RNA interactions for Protein: O88509

Dnmt3b, DNA (cytosine-5)-methyltransferase 3B, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dnmt3bO88509 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Dnmt3bO88509 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Dnmt3bO88509 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC14.17□□□□□ -0.14
Dnmt3bO88509 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC14.17□□□□□ -0.14
Dnmt3bO88509 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC14.17□□□□□ -0.14
Dnmt3bO88509 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Dnmt3bO88509 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Dnmt3bO88509 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Dnmt3bO88509 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Dnmt3bO88509 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Dnmt3bO88509 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC14.17□□□□□ -0.14
Dnmt3bO88509 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Dnmt3bO88509 Gm14701-201ENSMUST00000117156 348 ntBASIC14.17□□□□□ -0.14
Dnmt3bO88509 Gm14722-201ENSMUST00000118943 689 ntBASIC14.17□□□□□ -0.14
Dnmt3bO88509 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Dnmt3bO88509 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC14.17□□□□□ -0.14
Dnmt3bO88509 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC14.17□□□□□ -0.14
Dnmt3bO88509 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Dnmt3bO88509 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
Dnmt3bO88509 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Dnmt3bO88509 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Dnmt3bO88509 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC14.17□□□□□ -0.14
Dnmt3bO88509 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Dnmt3bO88509 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Dnmt3bO88509 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Dnmt3bO88509 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Dnmt3bO88509 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Dnmt3bO88509 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Dnmt3bO88509 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Dnmt3bO88509 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Dnmt3bO88509 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC14.17□□□□□ -0.14
Dnmt3bO88509 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Dnmt3bO88509 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Dnmt3bO88509 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Dnmt3bO88509 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Dnmt3bO88509 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Dnmt3bO88509 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
Dnmt3bO88509 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Dnmt3bO88509 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Dnmt3bO88509 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Dnmt3bO88509 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Dnmt3bO88509 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Dnmt3bO88509 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC14.16□□□□□ -0.14
Dnmt3bO88509 H2af-ps-201ENSMUST00000119066 295 ntBASIC14.16□□□□□ -0.14
Dnmt3bO88509 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC14.16□□□□□ -0.14
Dnmt3bO88509 Gm17271-201ENSMUST00000165535 355 ntBASIC14.16□□□□□ -0.14
Dnmt3bO88509 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
Dnmt3bO88509 Chchd1-203ENSMUST00000224633 557 ntBASIC14.16□□□□□ -0.14
Dnmt3bO88509 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Dnmt3bO88509 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC14.16□□□□□ -0.14
Dnmt3bO88509 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Dnmt3bO88509 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Dnmt3bO88509 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Dnmt3bO88509 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC14.16□□□□□ -0.14
Dnmt3bO88509 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Dnmt3bO88509 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Dnmt3bO88509 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Dnmt3bO88509 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Dnmt3bO88509 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Dnmt3bO88509 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Dnmt3bO88509 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Dnmt3bO88509 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Dnmt3bO88509 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Dnmt3bO88509 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Dnmt3bO88509 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Dnmt3bO88509 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Dnmt3bO88509 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Dnmt3bO88509 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Dnmt3bO88509 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Dnmt3bO88509 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Dnmt3bO88509 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Dnmt3bO88509 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Dnmt3bO88509 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Dnmt3bO88509 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Dnmt3bO88509 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Dnmt3bO88509 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC14.15□□□□□ -0.14
Dnmt3bO88509 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC14.15□□□□□ -0.14
Dnmt3bO88509 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
Dnmt3bO88509 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Dnmt3bO88509 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC14.15□□□□□ -0.14
Dnmt3bO88509 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Dnmt3bO88509 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC14.15□□□□□ -0.14
Dnmt3bO88509 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Dnmt3bO88509 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Dnmt3bO88509 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Dnmt3bO88509 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC14.15□□□□□ -0.14
Dnmt3bO88509 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Dnmt3bO88509 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Dnmt3bO88509 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Dnmt3bO88509 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Dnmt3bO88509 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Dnmt3bO88509 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Dnmt3bO88509 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Dnmt3bO88509 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Dnmt3bO88509 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Dnmt3bO88509 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Dnmt3bO88509 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Dnmt3bO88509 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Dnmt3bO88509 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Dnmt3bO88509 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms