Protein–RNA interactions for Protein: O88343

Slc4a4, Electrogenic sodium bicarbonate cotransporter 1, mousemouse

Predictions only

Length 1,079 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc4a4O88343 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Slc4a4O88343 Gm13517-201ENSMUST00000120782 1495 ntBASIC17.3■□□□□ 0.36
Slc4a4O88343 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC17.3■□□□□ 0.36
Slc4a4O88343 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Slc4a4O88343 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
Slc4a4O88343 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Slc4a4O88343 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Slc4a4O88343 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Slc4a4O88343 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Slc4a4O88343 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Slc4a4O88343 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Slc4a4O88343 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Slc4a4O88343 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Slc4a4O88343 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Slc4a4O88343 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Slc4a4O88343 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Slc4a4O88343 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
Slc4a4O88343 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Slc4a4O88343 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Slc4a4O88343 Gm37230-201ENSMUST00000194491 818 ntBASIC17.29■□□□□ 0.36
Slc4a4O88343 AC159114.1-201ENSMUST00000220349 266 ntBASIC17.29■□□□□ 0.36
Slc4a4O88343 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Slc4a4O88343 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC17.29■□□□□ 0.36
Slc4a4O88343 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Slc4a4O88343 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Slc4a4O88343 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Slc4a4O88343 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Slc4a4O88343 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Slc4a4O88343 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Slc4a4O88343 Camk2g-217ENSMUST00000226630 1937 ntBASIC17.29■□□□□ 0.36
Slc4a4O88343 Gm16425-201ENSMUST00000118143 3130 ntBASIC17.29■□□□□ 0.36
Slc4a4O88343 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Slc4a4O88343 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Slc4a4O88343 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Slc4a4O88343 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Slc4a4O88343 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Slc4a4O88343 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
Slc4a4O88343 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Slc4a4O88343 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC17.28■□□□□ 0.36
Slc4a4O88343 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC17.28■□□□□ 0.36
Slc4a4O88343 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Slc4a4O88343 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Slc4a4O88343 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Slc4a4O88343 Gm5357-201ENSMUST00000212720 1924 ntBASIC17.28■□□□□ 0.36
Slc4a4O88343 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Slc4a4O88343 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC17.28■□□□□ 0.36
Slc4a4O88343 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Slc4a4O88343 Auts2-212ENSMUST00000178555 309 ntBASIC17.28■□□□□ 0.36
Slc4a4O88343 Gm37277-201ENSMUST00000194052 1111 ntBASIC17.28■□□□□ 0.36
Slc4a4O88343 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Slc4a4O88343 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Slc4a4O88343 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Slc4a4O88343 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Slc4a4O88343 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC17.28■□□□□ 0.36
Slc4a4O88343 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Slc4a4O88343 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Slc4a4O88343 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Slc4a4O88343 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Slc4a4O88343 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Slc4a4O88343 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Slc4a4O88343 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Slc4a4O88343 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Slc4a4O88343 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Slc4a4O88343 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Slc4a4O88343 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Slc4a4O88343 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Slc4a4O88343 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Slc4a4O88343 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Slc4a4O88343 Gm6539-201ENSMUST00000119157 1064 ntBASIC17.27■□□□□ 0.36
Slc4a4O88343 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Slc4a4O88343 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC17.27■□□□□ 0.36
Slc4a4O88343 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Slc4a4O88343 Gm10576-201ENSMUST00000191927 825 ntBASIC17.27■□□□□ 0.36
Slc4a4O88343 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Slc4a4O88343 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Slc4a4O88343 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Slc4a4O88343 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Slc4a4O88343 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Slc4a4O88343 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Slc4a4O88343 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Slc4a4O88343 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Slc4a4O88343 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
Slc4a4O88343 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Slc4a4O88343 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Slc4a4O88343 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
Slc4a4O88343 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Slc4a4O88343 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Slc4a4O88343 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Slc4a4O88343 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
Slc4a4O88343 Carlr-201ENSMUST00000181515 2574 ntBASIC17.26■□□□□ 0.35
Slc4a4O88343 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Slc4a4O88343 Gm8410-201ENSMUST00000117225 605 ntBASIC17.26■□□□□ 0.35
Slc4a4O88343 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Slc4a4O88343 Gm13823-201ENSMUST00000119930 345 ntBASIC17.26■□□□□ 0.35
Slc4a4O88343 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Slc4a4O88343 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Slc4a4O88343 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Slc4a4O88343 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Slc4a4O88343 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Slc4a4O88343 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms