Protein–RNA interactions for Protein: O70209

Pdlim3, PDZ and LIM domain protein 3, mousemouse

Known RBP Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim3O70209 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC13.31□□□□□ -0.28
Pdlim3O70209 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC13.31□□□□□ -0.28
Pdlim3O70209 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pdlim3O70209 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Pdlim3O70209 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pdlim3O70209 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pdlim3O70209 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pdlim3O70209 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Pdlim3O70209 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pdlim3O70209 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Pdlim3O70209 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pdlim3O70209 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pdlim3O70209 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC13.3□□□□□ -0.28
Pdlim3O70209 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Pdlim3O70209 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pdlim3O70209 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Pdlim3O70209 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC13.3□□□□□ -0.28
Pdlim3O70209 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Pdlim3O70209 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Pdlim3O70209 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
Pdlim3O70209 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Pdlim3O70209 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC13.3□□□□□ -0.28
Pdlim3O70209 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pdlim3O70209 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Pdlim3O70209 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Pdlim3O70209 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pdlim3O70209 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC13.3□□□□□ -0.28
Pdlim3O70209 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pdlim3O70209 Trav13-3-201ENSMUST00000117226 336 ntBASIC13.3□□□□□ -0.28
Pdlim3O70209 Gm4535-201ENSMUST00000182274 558 ntBASIC13.3□□□□□ -0.28
Pdlim3O70209 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC13.3□□□□□ -0.28
Pdlim3O70209 Gm5253-201ENSMUST00000187104 1025 ntBASIC13.3□□□□□ -0.28
Pdlim3O70209 Gm13830-205ENSMUST00000201195 1155 ntBASIC13.3□□□□□ -0.28
Pdlim3O70209 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC13.3□□□□□ -0.28
Pdlim3O70209 CT010506.4-201ENSMUST00000225457 351 ntBASIC13.3□□□□□ -0.28
Pdlim3O70209 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pdlim3O70209 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pdlim3O70209 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pdlim3O70209 Gm10355-201ENSMUST00000097146 517 ntBASIC13.3□□□□□ -0.28
Pdlim3O70209 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Pdlim3O70209 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pdlim3O70209 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pdlim3O70209 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pdlim3O70209 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pdlim3O70209 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pdlim3O70209 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Pdlim3O70209 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pdlim3O70209 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pdlim3O70209 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC13.3□□□□□ -0.28
Pdlim3O70209 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pdlim3O70209 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pdlim3O70209 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Pdlim3O70209 Gm4081-201ENSMUST00000195287 1838 ntBASIC13.29□□□□□ -0.28
Pdlim3O70209 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pdlim3O70209 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pdlim3O70209 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pdlim3O70209 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Pdlim3O70209 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pdlim3O70209 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pdlim3O70209 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pdlim3O70209 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Pdlim3O70209 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pdlim3O70209 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Pdlim3O70209 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Pdlim3O70209 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pdlim3O70209 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pdlim3O70209 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pdlim3O70209 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pdlim3O70209 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Pdlim3O70209 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pdlim3O70209 Gm10710-201ENSMUST00000047876 3971 ntBASIC13.29□□□□□ -0.28
Pdlim3O70209 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC13.29□□□□□ -0.28
Pdlim3O70209 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
Pdlim3O70209 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC13.29□□□□□ -0.28
Pdlim3O70209 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Pdlim3O70209 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pdlim3O70209 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pdlim3O70209 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC13.29□□□□□ -0.28
Pdlim3O70209 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC13.29□□□□□ -0.28
Pdlim3O70209 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pdlim3O70209 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pdlim3O70209 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC13.29□□□□□ -0.28
Pdlim3O70209 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pdlim3O70209 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC13.29□□□□□ -0.28
Pdlim3O70209 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pdlim3O70209 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pdlim3O70209 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pdlim3O70209 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC13.28□□□□□ -0.28
Pdlim3O70209 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Pdlim3O70209 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pdlim3O70209 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Pdlim3O70209 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
Pdlim3O70209 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Pdlim3O70209 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC13.28□□□□□ -0.28
Pdlim3O70209 Gm9682-201ENSMUST00000197505 556 ntBASIC13.28□□□□□ -0.28
Pdlim3O70209 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC13.28□□□□□ -0.28
Pdlim3O70209 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC13.28□□□□□ -0.28
Pdlim3O70209 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Pdlim3O70209 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pdlim3O70209 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC13.28□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms