Protein–RNA interactions for Protein: O70138

Mmp8, Neutrophil collagenase, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp8O70138 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Mmp8O70138 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Mmp8O70138 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Mmp8O70138 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC17.87■□□□□ 0.45
Mmp8O70138 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Mmp8O70138 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Mmp8O70138 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
Mmp8O70138 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Mmp8O70138 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Mmp8O70138 Gm8116-201ENSMUST00000182917 1201 ntBASIC17.87■□□□□ 0.45
Mmp8O70138 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC17.87■□□□□ 0.45
Mmp8O70138 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Mmp8O70138 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Mmp8O70138 Gm8396-201ENSMUST00000057361 823 ntBASIC17.87■□□□□ 0.45
Mmp8O70138 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Mmp8O70138 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Mmp8O70138 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Mmp8O70138 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Mmp8O70138 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Mmp8O70138 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
Mmp8O70138 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC17.86■□□□□ 0.45
Mmp8O70138 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC17.86■□□□□ 0.45
Mmp8O70138 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Mmp8O70138 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Mmp8O70138 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Mmp8O70138 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Mmp8O70138 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Mmp8O70138 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Mmp8O70138 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Mmp8O70138 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Mmp8O70138 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC17.86■□□□□ 0.45
Mmp8O70138 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Mmp8O70138 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Mmp8O70138 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
Mmp8O70138 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Mmp8O70138 Gm14042-201ENSMUST00000120139 833 ntBASIC17.86■□□□□ 0.45
Mmp8O70138 Gm26308-201ENSMUST00000157768 69 ntBASIC17.86■□□□□ 0.45
Mmp8O70138 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Mmp8O70138 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC17.86■□□□□ 0.45
Mmp8O70138 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Mmp8O70138 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Mmp8O70138 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC17.86■□□□□ 0.45
Mmp8O70138 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Mmp8O70138 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC17.86■□□□□ 0.45
Mmp8O70138 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Mmp8O70138 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Mmp8O70138 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Mmp8O70138 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Mmp8O70138 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Mmp8O70138 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Mmp8O70138 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Mmp8O70138 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Mmp8O70138 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC17.85■□□□□ 0.45
Mmp8O70138 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Mmp8O70138 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Mmp8O70138 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Mmp8O70138 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Mmp8O70138 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Mmp8O70138 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Mmp8O70138 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Mmp8O70138 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Mmp8O70138 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Mmp8O70138 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC17.85■□□□□ 0.45
Mmp8O70138 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Mmp8O70138 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Mmp8O70138 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC17.85■□□□□ 0.45
Mmp8O70138 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Mmp8O70138 Gm29541-201ENSMUST00000191351 678 ntBASIC17.85■□□□□ 0.45
Mmp8O70138 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Mmp8O70138 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Mmp8O70138 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Mmp8O70138 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Mmp8O70138 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC17.85■□□□□ 0.45
Mmp8O70138 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Mmp8O70138 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Mmp8O70138 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC17.85■□□□□ 0.45
Mmp8O70138 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Mmp8O70138 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Mmp8O70138 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Mmp8O70138 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Mmp8O70138 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC17.84■□□□□ 0.45
Mmp8O70138 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Mmp8O70138 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Mmp8O70138 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Mmp8O70138 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Mmp8O70138 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC17.84■□□□□ 0.45
Mmp8O70138 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Mmp8O70138 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Mmp8O70138 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Mmp8O70138 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC17.84■□□□□ 0.45
Mmp8O70138 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Mmp8O70138 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC17.84■□□□□ 0.45
Mmp8O70138 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Mmp8O70138 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Mmp8O70138 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Mmp8O70138 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC17.84■□□□□ 0.45
Mmp8O70138 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC17.84■□□□□ 0.45
Mmp8O70138 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC17.84■□□□□ 0.45
Mmp8O70138 Gm10275-202ENSMUST00000168697 495 ntBASIC17.84■□□□□ 0.45
Mmp8O70138 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC17.84■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms