Protein–RNA interactions for Protein: O35900

Lsm2, U6 snRNA-associated Sm-like protein LSm2, mousemouse

Known RBP Predictions only

Length 95 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm2O35900 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Lsm2O35900 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lsm2O35900 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC13.04□□□□□ -0.32
Lsm2O35900 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Lsm2O35900 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lsm2O35900 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Lsm2O35900 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lsm2O35900 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Lsm2O35900 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Lsm2O35900 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lsm2O35900 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lsm2O35900 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lsm2O35900 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Lsm2O35900 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC13.04□□□□□ -0.32
Lsm2O35900 Gm18244-201ENSMUST00000219747 1566 ntBASIC13.04□□□□□ -0.32
Lsm2O35900 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lsm2O35900 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Lsm2O35900 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Lsm2O35900 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Lsm2O35900 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Lsm2O35900 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Lsm2O35900 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lsm2O35900 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lsm2O35900 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lsm2O35900 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
Lsm2O35900 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lsm2O35900 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Lsm2O35900 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Lsm2O35900 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lsm2O35900 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Lsm2O35900 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lsm2O35900 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC13.04□□□□□ -0.32
Lsm2O35900 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Lsm2O35900 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Lsm2O35900 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Lsm2O35900 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lsm2O35900 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lsm2O35900 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Lsm2O35900 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lsm2O35900 Gm37411-201ENSMUST00000194180 2282 ntBASIC13.04□□□□□ -0.32
Lsm2O35900 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lsm2O35900 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lsm2O35900 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lsm2O35900 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lsm2O35900 Gm12626-201ENSMUST00000117339 1983 ntBASIC13.03□□□□□ -0.32
Lsm2O35900 Gm12623-201ENSMUST00000119849 1983 ntBASIC13.03□□□□□ -0.32
Lsm2O35900 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Lsm2O35900 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lsm2O35900 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Lsm2O35900 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lsm2O35900 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC13.03□□□□□ -0.32
Lsm2O35900 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lsm2O35900 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lsm2O35900 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lsm2O35900 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lsm2O35900 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Lsm2O35900 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Lsm2O35900 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC13.03□□□□□ -0.32
Lsm2O35900 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
Lsm2O35900 Gm15372-201ENSMUST00000120729 834 ntBASIC13.03□□□□□ -0.32
Lsm2O35900 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
Lsm2O35900 Gm9726-201ENSMUST00000180321 678 ntBASIC13.03□□□□□ -0.32
Lsm2O35900 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC13.03□□□□□ -0.32
Lsm2O35900 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC13.03□□□□□ -0.32
Lsm2O35900 AC108846.1-201ENSMUST00000214531 513 ntBASIC13.03□□□□□ -0.32
Lsm2O35900 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lsm2O35900 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lsm2O35900 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lsm2O35900 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lsm2O35900 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lsm2O35900 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Lsm2O35900 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lsm2O35900 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lsm2O35900 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC13.03□□□□□ -0.32
Lsm2O35900 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lsm2O35900 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Lsm2O35900 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lsm2O35900 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lsm2O35900 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lsm2O35900 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Lsm2O35900 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Lsm2O35900 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Lsm2O35900 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Lsm2O35900 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Lsm2O35900 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Lsm2O35900 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Lsm2O35900 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Lsm2O35900 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Lsm2O35900 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Lsm2O35900 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Lsm2O35900 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Lsm2O35900 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Lsm2O35900 Gm2308-201ENSMUST00000166539 1004 ntBASIC13.02□□□□□ -0.33
Lsm2O35900 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
Lsm2O35900 Gm18489-201ENSMUST00000172565 551 ntBASIC13.02□□□□□ -0.33
Lsm2O35900 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lsm2O35900 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC13.02□□□□□ -0.33
Lsm2O35900 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Lsm2O35900 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Lsm2O35900 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms