Protein–RNA interactions for Protein: O35305

Tnfrsf11a, Tumor necrosis factor receptor superfamily member 11A, mousemouse

Predictions only

Length 625 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf11aO35305 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC15.78■□□□□ 0.12
Tnfrsf11aO35305 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Tnfrsf11aO35305 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Tnfrsf11aO35305 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Tnfrsf11aO35305 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Tnfrsf11aO35305 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Tnfrsf11aO35305 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
Tnfrsf11aO35305 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Tnfrsf11aO35305 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Tnfrsf11aO35305 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Tnfrsf11aO35305 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Tnfrsf11aO35305 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Tnfrsf11aO35305 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Tnfrsf11aO35305 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Tnfrsf11aO35305 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Tnfrsf11aO35305 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Tnfrsf11aO35305 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
Tnfrsf11aO35305 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Tnfrsf11aO35305 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Tnfrsf11aO35305 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Tnfrsf11aO35305 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Tnfrsf11aO35305 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Tnfrsf11aO35305 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Tnfrsf11aO35305 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Tnfrsf11aO35305 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Tnfrsf11aO35305 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC15.77■□□□□ 0.12
Tnfrsf11aO35305 Mir1895-201ENSMUST00000122615 79 ntBASIC15.77■□□□□ 0.12
Tnfrsf11aO35305 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC15.77■□□□□ 0.12
Tnfrsf11aO35305 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC15.77■□□□□ 0.12
Tnfrsf11aO35305 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Tnfrsf11aO35305 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC15.77■□□□□ 0.12
Tnfrsf11aO35305 Gm18889-201ENSMUST00000174284 929 ntBASIC15.77■□□□□ 0.12
Tnfrsf11aO35305 Gm2213-201ENSMUST00000197485 688 ntBASIC15.77■□□□□ 0.12
Tnfrsf11aO35305 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Tnfrsf11aO35305 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Tnfrsf11aO35305 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Tnfrsf11aO35305 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC15.77■□□□□ 0.11
Tnfrsf11aO35305 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Tnfrsf11aO35305 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
Tnfrsf11aO35305 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Tnfrsf11aO35305 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Tnfrsf11aO35305 CT025626.1-201ENSMUST00000223735 1455 ntBASIC15.77■□□□□ 0.11
Tnfrsf11aO35305 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
Tnfrsf11aO35305 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Tnfrsf11aO35305 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC15.77■□□□□ 0.11
Tnfrsf11aO35305 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Tnfrsf11aO35305 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.11
Tnfrsf11aO35305 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Tnfrsf11aO35305 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Tnfrsf11aO35305 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Tnfrsf11aO35305 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Tnfrsf11aO35305 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Tnfrsf11aO35305 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Tnfrsf11aO35305 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC15.76■□□□□ 0.11
Tnfrsf11aO35305 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Tnfrsf11aO35305 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Tnfrsf11aO35305 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Tnfrsf11aO35305 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Tnfrsf11aO35305 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Tnfrsf11aO35305 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Tnfrsf11aO35305 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC15.76■□□□□ 0.11
Tnfrsf11aO35305 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Tnfrsf11aO35305 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Tnfrsf11aO35305 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC15.76■□□□□ 0.11
Tnfrsf11aO35305 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC15.76■□□□□ 0.11
Tnfrsf11aO35305 Rprl2-201ENSMUST00000157150 290 ntBASIC15.76■□□□□ 0.11
Tnfrsf11aO35305 Gm44335-201ENSMUST00000196879 141 ntBASIC15.76■□□□□ 0.11
Tnfrsf11aO35305 Gm43073-201ENSMUST00000198200 1189 ntBASIC15.76■□□□□ 0.11
Tnfrsf11aO35305 Gm44297-201ENSMUST00000198304 141 ntBASIC15.76■□□□□ 0.11
Tnfrsf11aO35305 Gm44346-201ENSMUST00000198851 141 ntBASIC15.76■□□□□ 0.11
Tnfrsf11aO35305 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC15.76■□□□□ 0.11
Tnfrsf11aO35305 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC15.76■□□□□ 0.11
Tnfrsf11aO35305 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Tnfrsf11aO35305 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Tnfrsf11aO35305 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Tnfrsf11aO35305 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Tnfrsf11aO35305 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Tnfrsf11aO35305 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Tnfrsf11aO35305 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC15.76■□□□□ 0.11
Tnfrsf11aO35305 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Tnfrsf11aO35305 Gm44645-201ENSMUST00000205492 1653 ntBASIC15.76■□□□□ 0.11
Tnfrsf11aO35305 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC15.76■□□□□ 0.11
Tnfrsf11aO35305 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Tnfrsf11aO35305 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Tnfrsf11aO35305 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Tnfrsf11aO35305 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC15.75■□□□□ 0.11
Tnfrsf11aO35305 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Tnfrsf11aO35305 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC15.75■□□□□ 0.11
Tnfrsf11aO35305 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Tnfrsf11aO35305 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Tnfrsf11aO35305 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Tnfrsf11aO35305 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Tnfrsf11aO35305 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Tnfrsf11aO35305 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Tnfrsf11aO35305 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC15.75■□□□□ 0.11
Tnfrsf11aO35305 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC15.75■□□□□ 0.11
Tnfrsf11aO35305 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC15.75■□□□□ 0.11
Tnfrsf11aO35305 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC15.75■□□□□ 0.11
Tnfrsf11aO35305 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Tnfrsf11aO35305 Gm2756-201ENSMUST00000195851 400 ntBASIC15.75■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 55.6 ms