Protein–RNA interactions for Protein: O35235

Tnfsf11, Tumor necrosis factor ligand superfamily member 11, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf11O35235 Mxra8os-201ENSMUST00000097740 687 ntBASIC11.46□□□□□ -0.57
Tnfsf11O35235 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Tnfsf11O35235 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC11.46□□□□□ -0.57
Tnfsf11O35235 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Tnfsf11O35235 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Tnfsf11O35235 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Tnfsf11O35235 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Tnfsf11O35235 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Tnfsf11O35235 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
Tnfsf11O35235 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Tnfsf11O35235 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Tnfsf11O35235 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Tnfsf11O35235 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
Tnfsf11O35235 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Tnfsf11O35235 Gm43570-201ENSMUST00000199951 3688 ntBASIC11.46□□□□□ -0.58
Tnfsf11O35235 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Tnfsf11O35235 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Tnfsf11O35235 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC11.46□□□□□ -0.58
Tnfsf11O35235 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
Tnfsf11O35235 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Tnfsf11O35235 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Tnfsf11O35235 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Tnfsf11O35235 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Tnfsf11O35235 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC11.45□□□□□ -0.58
Tnfsf11O35235 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC11.45□□□□□ -0.58
Tnfsf11O35235 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Tnfsf11O35235 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Tnfsf11O35235 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC11.45□□□□□ -0.58
Tnfsf11O35235 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Tnfsf11O35235 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Tnfsf11O35235 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Tnfsf11O35235 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Tnfsf11O35235 Acot6-202ENSMUST00000222921 3622 ntBASIC11.45□□□□□ -0.58
Tnfsf11O35235 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Tnfsf11O35235 Gm45779-201ENSMUST00000212189 4064 ntBASIC11.45□□□□□ -0.58
Tnfsf11O35235 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Tnfsf11O35235 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Tnfsf11O35235 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Tnfsf11O35235 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Tnfsf11O35235 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Tnfsf11O35235 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Tnfsf11O35235 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC11.45□□□□□ -0.58
Tnfsf11O35235 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Tnfsf11O35235 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Tnfsf11O35235 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC11.45□□□□□ -0.58
Tnfsf11O35235 Rprl3-201ENSMUST00000157400 290 ntBASIC11.45□□□□□ -0.58
Tnfsf11O35235 Gm25016-201ENSMUST00000158399 131 ntBASIC11.45□□□□□ -0.58
Tnfsf11O35235 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Tnfsf11O35235 Gm6345-202ENSMUST00000180900 204 ntBASIC11.45□□□□□ -0.58
Tnfsf11O35235 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Tnfsf11O35235 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Tnfsf11O35235 Ighv6-1-201ENSMUST00000193612 343 ntBASIC11.45□□□□□ -0.58
Tnfsf11O35235 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Tnfsf11O35235 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Tnfsf11O35235 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC11.45□□□□□ -0.58
Tnfsf11O35235 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC11.45□□□□□ -0.58
Tnfsf11O35235 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Tnfsf11O35235 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Tnfsf11O35235 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Tnfsf11O35235 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Tnfsf11O35235 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Tnfsf11O35235 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Tnfsf11O35235 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Tnfsf11O35235 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC11.45□□□□□ -0.58
Tnfsf11O35235 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Tnfsf11O35235 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Tnfsf11O35235 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Tnfsf11O35235 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC11.45□□□□□ -0.58
Tnfsf11O35235 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Tnfsf11O35235 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Tnfsf11O35235 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC11.45□□□□□ -0.58
Tnfsf11O35235 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Tnfsf11O35235 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Tnfsf11O35235 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Tnfsf11O35235 Gm8258-201ENSMUST00000055593 1449 ntBASIC11.44□□□□□ -0.58
Tnfsf11O35235 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Tnfsf11O35235 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Tnfsf11O35235 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Tnfsf11O35235 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC11.44□□□□□ -0.58
Tnfsf11O35235 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Tnfsf11O35235 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Tnfsf11O35235 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Tnfsf11O35235 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Tnfsf11O35235 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Tnfsf11O35235 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Tnfsf11O35235 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Tnfsf11O35235 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Tnfsf11O35235 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Tnfsf11O35235 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Tnfsf11O35235 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Tnfsf11O35235 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC11.44□□□□□ -0.58
Tnfsf11O35235 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Tnfsf11O35235 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Tnfsf11O35235 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Tnfsf11O35235 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Tnfsf11O35235 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
Tnfsf11O35235 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Tnfsf11O35235 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Tnfsf11O35235 Gm43364-201ENSMUST00000196046 3274 ntBASIC11.44□□□□□ -0.58
Tnfsf11O35235 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms