Protein–RNA interactions for Protein: O35118

Gfra3, GDNF family receptor alpha-3, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gfra3O35118 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Gfra3O35118 Gm22065-201ENSMUST00000103753 110 ntBASIC12.7□□□□□ -0.38
Gfra3O35118 Gm22066-201ENSMUST00000103761 110 ntBASIC12.7□□□□□ -0.38
Gfra3O35118 Gm24932-201ENSMUST00000103763 110 ntBASIC12.7□□□□□ -0.38
Gfra3O35118 Gm24115-201ENSMUST00000103799 110 ntBASIC12.7□□□□□ -0.38
Gfra3O35118 Gm22190-201ENSMUST00000103827 110 ntBASIC12.7□□□□□ -0.38
Gfra3O35118 Gm22191-201ENSMUST00000103831 110 ntBASIC12.7□□□□□ -0.38
Gfra3O35118 Gm24721-201ENSMUST00000103849 110 ntBASIC12.7□□□□□ -0.38
Gfra3O35118 Gm28018-201ENSMUST00000103869 110 ntBASIC12.7□□□□□ -0.38
Gfra3O35118 Gm26399-201ENSMUST00000103937 110 ntBASIC12.7□□□□□ -0.38
Gfra3O35118 Mir449b-201ENSMUST00000104833 80 ntBASIC12.7□□□□□ -0.38
Gfra3O35118 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC12.7□□□□□ -0.38
Gfra3O35118 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC12.7□□□□□ -0.38
Gfra3O35118 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC12.7□□□□□ -0.38
Gfra3O35118 Gm18737-201ENSMUST00000173594 937 ntBASIC12.7□□□□□ -0.38
Gfra3O35118 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC12.7□□□□□ -0.38
Gfra3O35118 Gm25948-201ENSMUST00000175334 112 ntBASIC12.7□□□□□ -0.38
Gfra3O35118 Gm25349-201ENSMUST00000177728 110 ntBASIC12.7□□□□□ -0.38
Gfra3O35118 Gm23616-201ENSMUST00000177797 110 ntBASIC12.7□□□□□ -0.38
Gfra3O35118 Gm25871-201ENSMUST00000177816 110 ntBASIC12.7□□□□□ -0.38
Gfra3O35118 Gm24752-201ENSMUST00000178240 110 ntBASIC12.7□□□□□ -0.38
Gfra3O35118 Gm24496-201ENSMUST00000178287 110 ntBASIC12.7□□□□□ -0.38
Gfra3O35118 Gm25649-201ENSMUST00000178476 110 ntBASIC12.7□□□□□ -0.38
Gfra3O35118 Gm25548-201ENSMUST00000178681 110 ntBASIC12.7□□□□□ -0.38
Gfra3O35118 Gm23147-201ENSMUST00000178841 110 ntBASIC12.7□□□□□ -0.38
Gfra3O35118 Gm26095-201ENSMUST00000179270 110 ntBASIC12.7□□□□□ -0.38
Gfra3O35118 Gm22171-201ENSMUST00000179283 110 ntBASIC12.7□□□□□ -0.38
Gfra3O35118 Gm23936-201ENSMUST00000179354 110 ntBASIC12.7□□□□□ -0.38
Gfra3O35118 Gm22619-201ENSMUST00000179516 110 ntBASIC12.7□□□□□ -0.38
Gfra3O35118 Gm25255-201ENSMUST00000179579 110 ntBASIC12.7□□□□□ -0.38
Gfra3O35118 Gm24755-201ENSMUST00000179691 110 ntBASIC12.7□□□□□ -0.38
Gfra3O35118 Gm26506-201ENSMUST00000179692 110 ntBASIC12.7□□□□□ -0.38
Gfra3O35118 Gm25086-201ENSMUST00000179931 110 ntBASIC12.7□□□□□ -0.38
Gfra3O35118 Gm23243-201ENSMUST00000180047 110 ntBASIC12.7□□□□□ -0.38
Gfra3O35118 Gm24659-201ENSMUST00000180212 110 ntBASIC12.7□□□□□ -0.38
Gfra3O35118 Gm24169-201ENSMUST00000180244 110 ntBASIC12.7□□□□□ -0.38
Gfra3O35118 Gm23689-201ENSMUST00000180354 110 ntBASIC12.7□□□□□ -0.38
Gfra3O35118 Gm27359-201ENSMUST00000184153 110 ntBASIC12.7□□□□□ -0.38
Gfra3O35118 Gm27785-201ENSMUST00000184268 110 ntBASIC12.7□□□□□ -0.38
Gfra3O35118 Gm27466-201ENSMUST00000184396 110 ntBASIC12.7□□□□□ -0.38
Gfra3O35118 Gm27703-201ENSMUST00000184836 110 ntBASIC12.7□□□□□ -0.38
Gfra3O35118 Gm7774-201ENSMUST00000200064 533 ntBASIC12.7□□□□□ -0.38
Gfra3O35118 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC12.7□□□□□ -0.38
Gfra3O35118 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC12.7□□□□□ -0.38
Gfra3O35118 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC12.7□□□□□ -0.38
Gfra3O35118 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Gfra3O35118 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Gfra3O35118 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Gfra3O35118 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Gfra3O35118 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Gfra3O35118 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Gfra3O35118 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Gfra3O35118 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Gfra3O35118 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Gfra3O35118 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC12.69□□□□□ -0.38
Gfra3O35118 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC12.69□□□□□ -0.38
Gfra3O35118 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Gfra3O35118 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Gfra3O35118 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Gfra3O35118 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Gfra3O35118 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Gfra3O35118 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Gfra3O35118 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC12.69□□□□□ -0.38
Gfra3O35118 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Gfra3O35118 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Gfra3O35118 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Gfra3O35118 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Gfra3O35118 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Gfra3O35118 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Gfra3O35118 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Gfra3O35118 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Gfra3O35118 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Gfra3O35118 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Gfra3O35118 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Gfra3O35118 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Gfra3O35118 Gm25287-201ENSMUST00000103846 110 ntBASIC12.69□□□□□ -0.38
Gfra3O35118 Gm22918-201ENSMUST00000103855 110 ntBASIC12.69□□□□□ -0.38
Gfra3O35118 Gm12962-202ENSMUST00000144212 691 ntTSL 2 BASIC12.69□□□□□ -0.38
Gfra3O35118 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC12.69□□□□□ -0.38
Gfra3O35118 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Gfra3O35118 Gm24158-201ENSMUST00000175263 71 ntBASIC12.69□□□□□ -0.38
Gfra3O35118 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC12.69□□□□□ -0.38
Gfra3O35118 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Gfra3O35118 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC12.69□□□□□ -0.38
Gfra3O35118 AC154621.1-201ENSMUST00000226155 1119 ntBASIC12.69□□□□□ -0.38
Gfra3O35118 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Gfra3O35118 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Gfra3O35118 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC12.69□□□□□ -0.38
Gfra3O35118 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Gfra3O35118 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Gfra3O35118 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Gfra3O35118 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Gfra3O35118 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Gfra3O35118 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Gfra3O35118 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Gfra3O35118 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Gfra3O35118 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Gfra3O35118 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC12.69□□□□□ -0.38
Gfra3O35118 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Gfra3O35118 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms