Protein–RNA interactions for Protein: O08848

Trove2, 60 kDa SS-A/Ro ribonucleoprotein, mousemouse

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trove2O08848 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trove2O08848 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trove2O08848 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trove2O08848 Gm42829-201ENSMUST00000198417 2585 ntBASIC15.09■□□□□ 0.01
Trove2O08848 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trove2O08848 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Trove2O08848 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trove2O08848 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trove2O08848 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Trove2O08848 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trove2O08848 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trove2O08848 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trove2O08848 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC15.08■□□□□ 0.01
Trove2O08848 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC15.08■□□□□ 0.01
Trove2O08848 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0.01
Trove2O08848 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Trove2O08848 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Trove2O08848 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC15.08■□□□□ 0
Trove2O08848 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trove2O08848 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Trove2O08848 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trove2O08848 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trove2O08848 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trove2O08848 Gm8097-201ENSMUST00000117903 829 ntBASIC15.08■□□□□ 0
Trove2O08848 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Trove2O08848 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC15.08■□□□□ 0
Trove2O08848 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC15.08■□□□□ 0
Trove2O08848 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trove2O08848 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Trove2O08848 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC15.08■□□□□ 0
Trove2O08848 Kcnk16-202ENSMUST00000225596 2127 ntBASIC15.08■□□□□ 0
Trove2O08848 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trove2O08848 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trove2O08848 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Trove2O08848 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trove2O08848 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trove2O08848 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trove2O08848 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trove2O08848 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC15.08■□□□□ 0
Trove2O08848 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC15.07■□□□□ 0
Trove2O08848 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trove2O08848 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC15.07■□□□□ 0
Trove2O08848 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trove2O08848 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trove2O08848 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Trove2O08848 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Trove2O08848 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Trove2O08848 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trove2O08848 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Trove2O08848 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC15.07■□□□□ 0
Trove2O08848 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC15.07■□□□□ 0
Trove2O08848 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trove2O08848 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC15.07■□□□□ 0
Trove2O08848 Gm14722-201ENSMUST00000118943 689 ntBASIC15.07■□□□□ 0
Trove2O08848 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trove2O08848 AC160338.1-201ENSMUST00000214232 705 ntBASIC15.07■□□□□ 0
Trove2O08848 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trove2O08848 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trove2O08848 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trove2O08848 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trove2O08848 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trove2O08848 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Trove2O08848 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Trove2O08848 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC15.07■□□□□ 0
Trove2O08848 Gm9947-201ENSMUST00000067599 2920 ntBASIC15.07■□□□□ 0
Trove2O08848 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trove2O08848 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trove2O08848 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trove2O08848 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trove2O08848 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC15.07■□□□□ 0
Trove2O08848 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trove2O08848 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trove2O08848 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trove2O08848 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC15.07■□□□□ 0
Trove2O08848 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trove2O08848 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trove2O08848 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Trove2O08848 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trove2O08848 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC15.06■□□□□ 0
Trove2O08848 Gm42632-201ENSMUST00000201707 2411 ntBASIC15.06■□□□□ 0
Trove2O08848 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC15.06■□□□□ 0
Trove2O08848 Carlr-201ENSMUST00000181515 2574 ntBASIC15.06■□□□□ 0
Trove2O08848 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Trove2O08848 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trove2O08848 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Trove2O08848 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trove2O08848 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trove2O08848 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Trove2O08848 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Trove2O08848 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Trove2O08848 Gm13830-205ENSMUST00000201195 1155 ntBASIC15.06■□□□□ 0
Trove2O08848 Gm10459-201ENSMUST00000202708 1155 ntBASIC15.06■□□□□ 0
Trove2O08848 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC15.06■□□□□ 0
Trove2O08848 Rbfox2-207ENSMUST00000227533 1041 ntBASIC15.06■□□□□ 0
Trove2O08848 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC15.06■□□□□ 0
Trove2O08848 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trove2O08848 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trove2O08848 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC15.06■□□□□ 0
Trove2O08848 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trove2O08848 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 70.9 ms