Protein–RNA interactions for Protein: O08784

Tcof1, Treacle protein, mousemouse

Known RBP Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tcof1O08784 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Tcof1O08784 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Tcof1O08784 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Tcof1O08784 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Tcof1O08784 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC17.16■□□□□ 0.34
Tcof1O08784 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Tcof1O08784 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Tcof1O08784 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Tcof1O08784 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC17.16■□□□□ 0.34
Tcof1O08784 Gm37812-201ENSMUST00000195216 2475 ntBASIC17.16■□□□□ 0.34
Tcof1O08784 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Tcof1O08784 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Tcof1O08784 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Tcof1O08784 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Tcof1O08784 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Tcof1O08784 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Tcof1O08784 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Tcof1O08784 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Tcof1O08784 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Tcof1O08784 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Tcof1O08784 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Tcof1O08784 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Tcof1O08784 Ighv8-7-201ENSMUST00000194349 297 ntBASIC17.16■□□□□ 0.34
Tcof1O08784 Gm20949-201ENSMUST00000206478 952 ntBASIC17.16■□□□□ 0.34
Tcof1O08784 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC17.16■□□□□ 0.34
Tcof1O08784 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Tcof1O08784 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Tcof1O08784 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Tcof1O08784 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Tcof1O08784 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Tcof1O08784 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tcof1O08784 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tcof1O08784 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC17.15■□□□□ 0.34
Tcof1O08784 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tcof1O08784 Gm12620-201ENSMUST00000119791 1986 ntBASIC17.15■□□□□ 0.34
Tcof1O08784 Gm12612-201ENSMUST00000140182 1986 ntBASIC17.15■□□□□ 0.34
Tcof1O08784 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tcof1O08784 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC17.15■□□□□ 0.34
Tcof1O08784 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tcof1O08784 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
Tcof1O08784 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Tcof1O08784 AC154767.3-201ENSMUST00000225150 1342 ntBASIC17.15■□□□□ 0.34
Tcof1O08784 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Tcof1O08784 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC17.15■□□□□ 0.34
Tcof1O08784 Gm7336-201ENSMUST00000107041 1232 ntBASIC17.15■□□□□ 0.34
Tcof1O08784 Gm8116-201ENSMUST00000182917 1201 ntBASIC17.15■□□□□ 0.34
Tcof1O08784 Olfr286-202ENSMUST00000205305 969 ntBASIC17.15■□□□□ 0.34
Tcof1O08784 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC17.15■□□□□ 0.34
Tcof1O08784 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tcof1O08784 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tcof1O08784 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tcof1O08784 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tcof1O08784 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.34
Tcof1O08784 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC17.14■□□□□ 0.34
Tcof1O08784 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tcof1O08784 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Tcof1O08784 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Tcof1O08784 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tcof1O08784 Gm13127-201ENSMUST00000118978 1389 ntBASIC17.14■□□□□ 0.33
Tcof1O08784 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tcof1O08784 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tcof1O08784 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tcof1O08784 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Tcof1O08784 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tcof1O08784 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Tcof1O08784 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Tcof1O08784 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Tcof1O08784 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Tcof1O08784 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Tcof1O08784 Mir7023-201ENSMUST00000185093 64 ntBASIC17.14■□□□□ 0.33
Tcof1O08784 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Tcof1O08784 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tcof1O08784 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tcof1O08784 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tcof1O08784 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Tcof1O08784 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tcof1O08784 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Tcof1O08784 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Tcof1O08784 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tcof1O08784 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tcof1O08784 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tcof1O08784 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tcof1O08784 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Tcof1O08784 Gm37912-201ENSMUST00000191895 3076 ntBASIC17.13■□□□□ 0.33
Tcof1O08784 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tcof1O08784 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tcof1O08784 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tcof1O08784 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Tcof1O08784 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
Tcof1O08784 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Tcof1O08784 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Tcof1O08784 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tcof1O08784 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Tcof1O08784 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tcof1O08784 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Tcof1O08784 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Tcof1O08784 Gm22175-201ENSMUST00000175007 78 ntBASIC17.13■□□□□ 0.33
Tcof1O08784 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Tcof1O08784 AC158529.1-201ENSMUST00000223618 239 ntBASIC17.13■□□□□ 0.33
Tcof1O08784 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms