Protein–RNA interactions for Protein: O08603

Raet1b, Retinoic acid early-inducible protein 1-beta, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1bO08603 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Raet1bO08603 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Raet1bO08603 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Raet1bO08603 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Raet1bO08603 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Raet1bO08603 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC13.01□□□□□ -0.33
Raet1bO08603 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Raet1bO08603 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Raet1bO08603 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Raet1bO08603 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Raet1bO08603 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Raet1bO08603 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC13□□□□□ -0.33
Raet1bO08603 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Raet1bO08603 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Raet1bO08603 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Raet1bO08603 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC13□□□□□ -0.33
Raet1bO08603 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Raet1bO08603 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Raet1bO08603 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Raet1bO08603 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Raet1bO08603 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Raet1bO08603 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Raet1bO08603 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Raet1bO08603 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Raet1bO08603 AC164565.1-201ENSMUST00000217520 1484 ntBASIC13□□□□□ -0.33
Raet1bO08603 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Raet1bO08603 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Raet1bO08603 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Raet1bO08603 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC13□□□□□ -0.33
Raet1bO08603 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Raet1bO08603 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Raet1bO08603 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Raet1bO08603 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Raet1bO08603 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Raet1bO08603 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC13□□□□□ -0.33
Raet1bO08603 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
Raet1bO08603 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC13□□□□□ -0.33
Raet1bO08603 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
Raet1bO08603 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC13□□□□□ -0.33
Raet1bO08603 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC13□□□□□ -0.33
Raet1bO08603 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Raet1bO08603 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Raet1bO08603 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Raet1bO08603 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Raet1bO08603 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Raet1bO08603 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Raet1bO08603 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Raet1bO08603 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Raet1bO08603 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Raet1bO08603 Tcf21-202ENSMUST00000218002 1788 ntBASIC12.99□□□□□ -0.33
Raet1bO08603 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Raet1bO08603 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Raet1bO08603 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Raet1bO08603 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC12.99□□□□□ -0.33
Raet1bO08603 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Raet1bO08603 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Raet1bO08603 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Raet1bO08603 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Raet1bO08603 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Raet1bO08603 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC12.99□□□□□ -0.33
Raet1bO08603 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Raet1bO08603 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC12.99□□□□□ -0.33
Raet1bO08603 Gm4691-201ENSMUST00000182339 1000 ntBASIC12.99□□□□□ -0.33
Raet1bO08603 Gm44492-201ENSMUST00000197012 141 ntBASIC12.99□□□□□ -0.33
Raet1bO08603 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Raet1bO08603 Gm2451-201ENSMUST00000199447 999 ntBASIC12.99□□□□□ -0.33
Raet1bO08603 Gm10290-201ENSMUST00000200451 999 ntBASIC12.99□□□□□ -0.33
Raet1bO08603 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC12.99□□□□□ -0.33
Raet1bO08603 Gm44771-201ENSMUST00000206975 626 ntBASIC12.99□□□□□ -0.33
Raet1bO08603 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC12.99□□□□□ -0.33
Raet1bO08603 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC12.99□□□□□ -0.33
Raet1bO08603 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Raet1bO08603 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Raet1bO08603 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Raet1bO08603 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Raet1bO08603 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Raet1bO08603 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Raet1bO08603 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Raet1bO08603 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Raet1bO08603 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Raet1bO08603 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC12.99□□□□□ -0.33
Raet1bO08603 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Raet1bO08603 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Raet1bO08603 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Raet1bO08603 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Raet1bO08603 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Raet1bO08603 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Raet1bO08603 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Raet1bO08603 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Raet1bO08603 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC12.98□□□□□ -0.33
Raet1bO08603 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Raet1bO08603 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Raet1bO08603 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Raet1bO08603 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Raet1bO08603 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Raet1bO08603 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Raet1bO08603 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Raet1bO08603 Gm9856-201ENSMUST00000217077 2578 ntBASIC12.98□□□□□ -0.33
Raet1bO08603 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Raet1bO08603 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 71.6 ms