Protein–RNA interactions for Protein: O08602

Raet1a, Retinoic acid early-inducible protein 1-alpha, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1aO08602 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Raet1aO08602 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Raet1aO08602 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Raet1aO08602 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Raet1aO08602 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Raet1aO08602 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Raet1aO08602 Gm13410-201ENSMUST00000117058 1415 ntBASIC13.01□□□□□ -0.33
Raet1aO08602 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Raet1aO08602 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Raet1aO08602 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC13.01□□□□□ -0.33
Raet1aO08602 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Raet1aO08602 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Raet1aO08602 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Raet1aO08602 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Raet1aO08602 Gm12620-201ENSMUST00000119791 1986 ntBASIC13.01□□□□□ -0.33
Raet1aO08602 Gm12612-201ENSMUST00000140182 1986 ntBASIC13.01□□□□□ -0.33
Raet1aO08602 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Raet1aO08602 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Raet1aO08602 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC13.01□□□□□ -0.33
Raet1aO08602 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Raet1aO08602 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Raet1aO08602 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Raet1aO08602 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Raet1aO08602 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Raet1aO08602 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Raet1aO08602 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Raet1aO08602 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Raet1aO08602 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Raet1aO08602 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Raet1aO08602 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC13□□□□□ -0.33
Raet1aO08602 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Raet1aO08602 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Raet1aO08602 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Raet1aO08602 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC13□□□□□ -0.33
Raet1aO08602 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Raet1aO08602 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Raet1aO08602 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Raet1aO08602 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC13□□□□□ -0.33
Raet1aO08602 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Raet1aO08602 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Raet1aO08602 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Raet1aO08602 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Raet1aO08602 AC164565.1-201ENSMUST00000217520 1484 ntBASIC13□□□□□ -0.33
Raet1aO08602 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Raet1aO08602 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Raet1aO08602 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Raet1aO08602 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Raet1aO08602 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC13□□□□□ -0.33
Raet1aO08602 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Raet1aO08602 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Raet1aO08602 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Raet1aO08602 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Raet1aO08602 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Raet1aO08602 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC13□□□□□ -0.33
Raet1aO08602 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
Raet1aO08602 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC13□□□□□ -0.33
Raet1aO08602 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
Raet1aO08602 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC13□□□□□ -0.33
Raet1aO08602 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC13□□□□□ -0.33
Raet1aO08602 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Raet1aO08602 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC13□□□□□ -0.33
Raet1aO08602 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Raet1aO08602 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Raet1aO08602 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Raet1aO08602 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Raet1aO08602 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Raet1aO08602 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Raet1aO08602 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Raet1aO08602 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Raet1aO08602 Tcf21-202ENSMUST00000218002 1788 ntBASIC12.99□□□□□ -0.33
Raet1aO08602 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Raet1aO08602 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
Raet1aO08602 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Raet1aO08602 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Raet1aO08602 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Raet1aO08602 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Raet1aO08602 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Raet1aO08602 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC12.99□□□□□ -0.33
Raet1aO08602 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Raet1aO08602 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Raet1aO08602 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Raet1aO08602 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Raet1aO08602 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Raet1aO08602 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Raet1aO08602 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Raet1aO08602 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC12.99□□□□□ -0.33
Raet1aO08602 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Raet1aO08602 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC12.99□□□□□ -0.33
Raet1aO08602 Gm4691-201ENSMUST00000182339 1000 ntBASIC12.99□□□□□ -0.33
Raet1aO08602 Gm44492-201ENSMUST00000197012 141 ntBASIC12.99□□□□□ -0.33
Raet1aO08602 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Raet1aO08602 Gm2451-201ENSMUST00000199447 999 ntBASIC12.99□□□□□ -0.33
Raet1aO08602 Gm10290-201ENSMUST00000200451 999 ntBASIC12.99□□□□□ -0.33
Raet1aO08602 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC12.99□□□□□ -0.33
Raet1aO08602 Gm44771-201ENSMUST00000206975 626 ntBASIC12.99□□□□□ -0.33
Raet1aO08602 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC12.99□□□□□ -0.33
Raet1aO08602 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC12.99□□□□□ -0.33
Raet1aO08602 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Raet1aO08602 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Raet1aO08602 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms