Protein–RNA interactions for Protein: G3X9Z4

Pcf11, Cleavage and polyadenylation factor subunit homolog (S. cerevisiae), mousemouse

Predictions only

Length 1,553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcf11G3X9Z4 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Pcf11G3X9Z4 Gm15376-201ENSMUST00000122258 783 ntBASIC21.91■■□□□ 1.1
Pcf11G3X9Z4 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC21.91■■□□□ 1.1
Pcf11G3X9Z4 Gm44719-201ENSMUST00000206404 149 ntBASIC21.91■■□□□ 1.1
Pcf11G3X9Z4 Gm5035-201ENSMUST00000215581 927 ntBASIC21.91■■□□□ 1.1
Pcf11G3X9Z4 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC21.91■■□□□ 1.1
Pcf11G3X9Z4 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC21.91■■□□□ 1.1
Pcf11G3X9Z4 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Pcf11G3X9Z4 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Pcf11G3X9Z4 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Pcf11G3X9Z4 Gm8131-201ENSMUST00000213783 1570 ntBASIC21.9■■□□□ 1.1
Pcf11G3X9Z4 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Pcf11G3X9Z4 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Pcf11G3X9Z4 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
Pcf11G3X9Z4 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Pcf11G3X9Z4 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Pcf11G3X9Z4 Mir6392-201ENSMUST00000184924 108 ntBASIC21.9■■□□□ 1.1
Pcf11G3X9Z4 Gm18187-201ENSMUST00000196476 984 ntBASIC21.9■■□□□ 1.1
Pcf11G3X9Z4 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Pcf11G3X9Z4 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC21.9■■□□□ 1.1
Pcf11G3X9Z4 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
Pcf11G3X9Z4 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Pcf11G3X9Z4 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Pcf11G3X9Z4 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Pcf11G3X9Z4 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Pcf11G3X9Z4 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
Pcf11G3X9Z4 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.1
Pcf11G3X9Z4 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
Pcf11G3X9Z4 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC21.89■■□□□ 1.09
Pcf11G3X9Z4 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC21.89■■□□□ 1.09
Pcf11G3X9Z4 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
Pcf11G3X9Z4 Gm8463-201ENSMUST00000208573 613 ntBASIC21.89■■□□□ 1.09
Pcf11G3X9Z4 Gm10584-201ENSMUST00000207036 2628 ntBASIC21.89■■□□□ 1.09
Pcf11G3X9Z4 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.09
Pcf11G3X9Z4 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Pcf11G3X9Z4 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Pcf11G3X9Z4 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Pcf11G3X9Z4 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Pcf11G3X9Z4 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Pcf11G3X9Z4 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Pcf11G3X9Z4 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Pcf11G3X9Z4 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
Pcf11G3X9Z4 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC21.88■■□□□ 1.09
Pcf11G3X9Z4 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Pcf11G3X9Z4 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Pcf11G3X9Z4 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Pcf11G3X9Z4 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC21.88■■□□□ 1.09
Pcf11G3X9Z4 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC21.88■■□□□ 1.09
Pcf11G3X9Z4 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Pcf11G3X9Z4 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Pcf11G3X9Z4 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Pcf11G3X9Z4 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Pcf11G3X9Z4 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Pcf11G3X9Z4 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Pcf11G3X9Z4 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Pcf11G3X9Z4 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
Pcf11G3X9Z4 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Pcf11G3X9Z4 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC21.88■■□□□ 1.09
Pcf11G3X9Z4 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Pcf11G3X9Z4 AC159196.2-201ENSMUST00000224082 1622 ntBASIC21.88■■□□□ 1.09
Pcf11G3X9Z4 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Pcf11G3X9Z4 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Pcf11G3X9Z4 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Pcf11G3X9Z4 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Pcf11G3X9Z4 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Pcf11G3X9Z4 AC139350.3-201ENSMUST00000226151 420 ntBASIC21.87■■□□□ 1.09
Pcf11G3X9Z4 Mir497b-201ENSMUST00000093601 125 ntBASIC21.87■■□□□ 1.09
Pcf11G3X9Z4 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Pcf11G3X9Z4 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Pcf11G3X9Z4 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Pcf11G3X9Z4 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
Pcf11G3X9Z4 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Pcf11G3X9Z4 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Pcf11G3X9Z4 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC21.87■■□□□ 1.09
Pcf11G3X9Z4 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
Pcf11G3X9Z4 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Pcf11G3X9Z4 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Pcf11G3X9Z4 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Pcf11G3X9Z4 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Pcf11G3X9Z4 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC21.87■■□□□ 1.09
Pcf11G3X9Z4 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Pcf11G3X9Z4 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Pcf11G3X9Z4 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
Pcf11G3X9Z4 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
Pcf11G3X9Z4 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
Pcf11G3X9Z4 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Pcf11G3X9Z4 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Pcf11G3X9Z4 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Pcf11G3X9Z4 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Pcf11G3X9Z4 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Pcf11G3X9Z4 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
Pcf11G3X9Z4 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Pcf11G3X9Z4 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Pcf11G3X9Z4 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Pcf11G3X9Z4 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Pcf11G3X9Z4 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Pcf11G3X9Z4 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Pcf11G3X9Z4 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
Pcf11G3X9Z4 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC21.86■■□□□ 1.09
Pcf11G3X9Z4 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms