Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Gm21825-201ENSMUST00000185728 696 ntBASIC17.59■□□□□ 0.41
NpcdF8VQB8 Gm29109-201ENSMUST00000185895 696 ntBASIC17.59■□□□□ 0.41
NpcdF8VQB8 Gm21896-201ENSMUST00000186520 696 ntBASIC17.59■□□□□ 0.41
NpcdF8VQB8 Gm21873-201ENSMUST00000186728 696 ntBASIC17.59■□□□□ 0.41
NpcdF8VQB8 Gm21794-201ENSMUST00000187056 696 ntBASIC17.59■□□□□ 0.41
NpcdF8VQB8 Gm21880-201ENSMUST00000187275 696 ntBASIC17.59■□□□□ 0.41
NpcdF8VQB8 Gm21826-201ENSMUST00000187451 696 ntBASIC17.59■□□□□ 0.41
NpcdF8VQB8 Gm21198-201ENSMUST00000188393 696 ntBASIC17.59■□□□□ 0.41
NpcdF8VQB8 Gm28911-201ENSMUST00000188837 117 ntBASIC17.59■□□□□ 0.41
NpcdF8VQB8 Gm21749-201ENSMUST00000189343 696 ntBASIC17.59■□□□□ 0.41
NpcdF8VQB8 Gm21901-201ENSMUST00000189568 696 ntBASIC17.59■□□□□ 0.41
NpcdF8VQB8 Gm29424-201ENSMUST00000189716 696 ntBASIC17.59■□□□□ 0.41
NpcdF8VQB8 Gm28599-201ENSMUST00000189838 694 ntBASIC17.59■□□□□ 0.41
NpcdF8VQB8 Gm21867-201ENSMUST00000189917 696 ntBASIC17.59■□□□□ 0.41
NpcdF8VQB8 Gm29269-201ENSMUST00000190087 696 ntBASIC17.59■□□□□ 0.41
NpcdF8VQB8 Gm21722-201ENSMUST00000190153 696 ntBASIC17.59■□□□□ 0.41
NpcdF8VQB8 Gm28423-201ENSMUST00000190701 696 ntBASIC17.59■□□□□ 0.41
NpcdF8VQB8 Gm21899-201ENSMUST00000190745 696 ntBASIC17.59■□□□□ 0.41
NpcdF8VQB8 Gm21910-201ENSMUST00000191163 696 ntBASIC17.59■□□□□ 0.41
NpcdF8VQB8 Gm21849-201ENSMUST00000191571 696 ntBASIC17.59■□□□□ 0.41
NpcdF8VQB8 Gm28678-201ENSMUST00000191593 696 ntBASIC17.59■□□□□ 0.41
NpcdF8VQB8 Gm20910-201ENSMUST00000193268 696 ntBASIC17.59■□□□□ 0.41
NpcdF8VQB8 Gm21871-201ENSMUST00000194621 696 ntBASIC17.59■□□□□ 0.41
NpcdF8VQB8 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
NpcdF8VQB8 AC165157.4-201ENSMUST00000220587 139 ntBASIC17.59■□□□□ 0.41
NpcdF8VQB8 Gm9257-201ENSMUST00000221254 232 ntBASIC17.59■□□□□ 0.41
NpcdF8VQB8 AC156016.3-201ENSMUST00000228623 344 ntBASIC17.59■□□□□ 0.41
NpcdF8VQB8 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NpcdF8VQB8 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
NpcdF8VQB8 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
NpcdF8VQB8 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NpcdF8VQB8 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
NpcdF8VQB8 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
NpcdF8VQB8 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
NpcdF8VQB8 Gm44616-201ENSMUST00000206417 1732 ntBASIC17.58■□□□□ 0.41
NpcdF8VQB8 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
NpcdF8VQB8 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
NpcdF8VQB8 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
NpcdF8VQB8 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
NpcdF8VQB8 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.41
NpcdF8VQB8 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
NpcdF8VQB8 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
NpcdF8VQB8 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC17.58■□□□□ 0.4
NpcdF8VQB8 Gm6222-201ENSMUST00000120787 396 ntBASIC17.58■□□□□ 0.4
NpcdF8VQB8 Gm27631-201ENSMUST00000184163 466 ntBASIC17.58■□□□□ 0.4
NpcdF8VQB8 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
NpcdF8VQB8 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC17.58■□□□□ 0.4
NpcdF8VQB8 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
NpcdF8VQB8 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
NpcdF8VQB8 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
NpcdF8VQB8 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
NpcdF8VQB8 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
NpcdF8VQB8 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NpcdF8VQB8 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NpcdF8VQB8 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
NpcdF8VQB8 Gm44729-201ENSMUST00000206759 2052 ntBASIC17.57■□□□□ 0.4
NpcdF8VQB8 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NpcdF8VQB8 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
NpcdF8VQB8 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC17.57■□□□□ 0.4
NpcdF8VQB8 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
NpcdF8VQB8 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
NpcdF8VQB8 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
NpcdF8VQB8 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NpcdF8VQB8 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NpcdF8VQB8 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NpcdF8VQB8 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC17.57■□□□□ 0.4
NpcdF8VQB8 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
NpcdF8VQB8 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
NpcdF8VQB8 Trav4d-2-201ENSMUST00000120914 335 ntBASIC17.57■□□□□ 0.4
NpcdF8VQB8 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC17.57■□□□□ 0.4
NpcdF8VQB8 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NpcdF8VQB8 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NpcdF8VQB8 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NpcdF8VQB8 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NpcdF8VQB8 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NpcdF8VQB8 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NpcdF8VQB8 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
NpcdF8VQB8 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
NpcdF8VQB8 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NpcdF8VQB8 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
NpcdF8VQB8 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
NpcdF8VQB8 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NpcdF8VQB8 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
NpcdF8VQB8 Gm38327-201ENSMUST00000195852 1755 ntBASIC17.56■□□□□ 0.4
NpcdF8VQB8 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC17.56■□□□□ 0.4
NpcdF8VQB8 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NpcdF8VQB8 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
NpcdF8VQB8 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
NpcdF8VQB8 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
NpcdF8VQB8 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
NpcdF8VQB8 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
NpcdF8VQB8 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
NpcdF8VQB8 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC17.56■□□□□ 0.4
NpcdF8VQB8 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
NpcdF8VQB8 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
NpcdF8VQB8 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC17.56■□□□□ 0.4
NpcdF8VQB8 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
NpcdF8VQB8 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NpcdF8VQB8 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NpcdF8VQB8 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms