Protein–RNA interactions for Protein: F6VAN0

Atf6, Cyclic AMP-dependent transcription factor ATF-6 alpha, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6F6VAN0 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Atf6F6VAN0 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Atf6F6VAN0 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC15.07■□□□□ 0
Atf6F6VAN0 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Atf6F6VAN0 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC15.07■□□□□ 0
Atf6F6VAN0 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Atf6F6VAN0 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC15.06■□□□□ 0
Atf6F6VAN0 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Atf6F6VAN0 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC15.06■□□□□ 0
Atf6F6VAN0 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC15.06■□□□□ 0
Atf6F6VAN0 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Atf6F6VAN0 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Atf6F6VAN0 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC15.06■□□□□ 0
Atf6F6VAN0 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC15.06■□□□□ 0
Atf6F6VAN0 Gm12260-201ENSMUST00000122447 411 ntBASIC15.06■□□□□ 0
Atf6F6VAN0 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Atf6F6VAN0 Gm27301-201ENSMUST00000184012 127 ntBASIC15.06■□□□□ 0
Atf6F6VAN0 5830487J09Rik-201ENSMUST00000198600 1256 ntTSL 5 BASIC15.06■□□□□ 0
Atf6F6VAN0 Gm18206-201ENSMUST00000207027 926 ntBASIC15.06■□□□□ 0
Atf6F6VAN0 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC15.06■□□□□ 0
Atf6F6VAN0 Gm45747-201ENSMUST00000212203 999 ntBASIC15.06■□□□□ 0
Atf6F6VAN0 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Atf6F6VAN0 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Atf6F6VAN0 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC15.06■□□□□ 0
Atf6F6VAN0 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC15.06■□□□□ 0
Atf6F6VAN0 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Atf6F6VAN0 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Atf6F6VAN0 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC15.06■□□□□ 0
Atf6F6VAN0 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Atf6F6VAN0 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Atf6F6VAN0 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Atf6F6VAN0 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Atf6F6VAN0 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Atf6F6VAN0 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC15.06■□□□□ 0
Atf6F6VAN0 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Atf6F6VAN0 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC15.06■□□□□ 0
Atf6F6VAN0 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC15.06■□□□□ 0
Atf6F6VAN0 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Atf6F6VAN0 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Atf6F6VAN0 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC15.06■□□□□ 0
Atf6F6VAN0 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC15.06■□□□□ 0
Atf6F6VAN0 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Atf6F6VAN0 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Atf6F6VAN0 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Atf6F6VAN0 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC15.05■□□□□ 0
Atf6F6VAN0 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Atf6F6VAN0 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Atf6F6VAN0 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Atf6F6VAN0 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC15.05■□□□□ 0
Atf6F6VAN0 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
Atf6F6VAN0 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Atf6F6VAN0 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC15.05■□□□□ -0
Atf6F6VAN0 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC15.05■□□□□ -0
Atf6F6VAN0 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC15.05■□□□□ -0
Atf6F6VAN0 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC15.05■□□□□ -0
Atf6F6VAN0 Gm16026-204ENSMUST00000162652 683 ntBASIC15.05■□□□□ -0
Atf6F6VAN0 Gm44945-201ENSMUST00000206764 1187 ntBASIC15.05■□□□□ -0
Atf6F6VAN0 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC15.05■□□□□ -0
Atf6F6VAN0 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Atf6F6VAN0 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Atf6F6VAN0 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC15.05■□□□□ -0
Atf6F6VAN0 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Atf6F6VAN0 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Atf6F6VAN0 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC15.05■□□□□ -0
Atf6F6VAN0 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Atf6F6VAN0 AC131586.3-201ENSMUST00000228355 1367 ntBASIC15.05■□□□□ -0
Atf6F6VAN0 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Atf6F6VAN0 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC15.05■□□□□ -0
Atf6F6VAN0 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Atf6F6VAN0 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC15.05■□□□□ -0
Atf6F6VAN0 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Atf6F6VAN0 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Atf6F6VAN0 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC15.05■□□□□ -0
Atf6F6VAN0 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Atf6F6VAN0 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC15.05■□□□□ -0
Atf6F6VAN0 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Atf6F6VAN0 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Atf6F6VAN0 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Atf6F6VAN0 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
Atf6F6VAN0 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Atf6F6VAN0 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Atf6F6VAN0 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Atf6F6VAN0 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
Atf6F6VAN0 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Atf6F6VAN0 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Atf6F6VAN0 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Atf6F6VAN0 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Atf6F6VAN0 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Atf6F6VAN0 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Atf6F6VAN0 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Atf6F6VAN0 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Atf6F6VAN0 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Atf6F6VAN0 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC15.04■□□□□ -0
Atf6F6VAN0 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC15.04■□□□□ -0
Atf6F6VAN0 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC15.04■□□□□ -0
Atf6F6VAN0 Gm9726-201ENSMUST00000180321 678 ntBASIC15.04■□□□□ -0
Atf6F6VAN0 AC174742.1-201ENSMUST00000218272 304 ntBASIC15.04■□□□□ -0
Atf6F6VAN0 AC159295.1-201ENSMUST00000225326 940 ntBASIC15.04■□□□□ -0
Atf6F6VAN0 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Atf6F6VAN0 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms