Protein–RNA interactions for Protein: E9Q9Q2

R3hdm1, R3H domain-containing 1, mousemouse

Known RBP Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3hdm1E9Q9Q2 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
R3hdm1E9Q9Q2 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
R3hdm1E9Q9Q2 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
R3hdm1E9Q9Q2 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
R3hdm1E9Q9Q2 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
R3hdm1E9Q9Q2 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
R3hdm1E9Q9Q2 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
R3hdm1E9Q9Q2 Gm6539-201ENSMUST00000119157 1064 ntBASIC16.18■□□□□ 0.18
R3hdm1E9Q9Q2 Gm15321-201ENSMUST00000121290 288 ntBASIC16.18■□□□□ 0.18
R3hdm1E9Q9Q2 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
R3hdm1E9Q9Q2 Gm16026-204ENSMUST00000162652 683 ntBASIC16.18■□□□□ 0.18
R3hdm1E9Q9Q2 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
R3hdm1E9Q9Q2 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
R3hdm1E9Q9Q2 Gm27680-201ENSMUST00000184192 160 ntBASIC16.18■□□□□ 0.18
R3hdm1E9Q9Q2 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC16.18■□□□□ 0.18
R3hdm1E9Q9Q2 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
R3hdm1E9Q9Q2 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
R3hdm1E9Q9Q2 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
R3hdm1E9Q9Q2 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
R3hdm1E9Q9Q2 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
R3hdm1E9Q9Q2 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
R3hdm1E9Q9Q2 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
R3hdm1E9Q9Q2 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
R3hdm1E9Q9Q2 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
R3hdm1E9Q9Q2 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
R3hdm1E9Q9Q2 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
R3hdm1E9Q9Q2 Gm11478-201ENSMUST00000117851 599 ntBASIC16.17■□□□□ 0.18
R3hdm1E9Q9Q2 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC16.17■□□□□ 0.18
R3hdm1E9Q9Q2 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC16.17■□□□□ 0.18
R3hdm1E9Q9Q2 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
R3hdm1E9Q9Q2 Gm45384-201ENSMUST00000210451 277 ntBASIC16.17■□□□□ 0.18
R3hdm1E9Q9Q2 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
R3hdm1E9Q9Q2 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC16.17■□□□□ 0.18
R3hdm1E9Q9Q2 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC16.17■□□□□ 0.18
R3hdm1E9Q9Q2 AC149294.4-201ENSMUST00000227870 882 ntBASIC16.17■□□□□ 0.18
R3hdm1E9Q9Q2 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
R3hdm1E9Q9Q2 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
R3hdm1E9Q9Q2 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
R3hdm1E9Q9Q2 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
R3hdm1E9Q9Q2 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
R3hdm1E9Q9Q2 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
R3hdm1E9Q9Q2 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
R3hdm1E9Q9Q2 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
R3hdm1E9Q9Q2 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
R3hdm1E9Q9Q2 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
R3hdm1E9Q9Q2 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
R3hdm1E9Q9Q2 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC16.16■□□□□ 0.18
R3hdm1E9Q9Q2 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
R3hdm1E9Q9Q2 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
R3hdm1E9Q9Q2 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
R3hdm1E9Q9Q2 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
R3hdm1E9Q9Q2 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
R3hdm1E9Q9Q2 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
R3hdm1E9Q9Q2 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
R3hdm1E9Q9Q2 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
R3hdm1E9Q9Q2 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
R3hdm1E9Q9Q2 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
R3hdm1E9Q9Q2 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
R3hdm1E9Q9Q2 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC16.16■□□□□ 0.18
R3hdm1E9Q9Q2 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC16.16■□□□□ 0.18
R3hdm1E9Q9Q2 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
R3hdm1E9Q9Q2 Gm27533-201ENSMUST00000183800 152 ntBASIC16.16■□□□□ 0.18
R3hdm1E9Q9Q2 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
R3hdm1E9Q9Q2 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
R3hdm1E9Q9Q2 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
R3hdm1E9Q9Q2 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
R3hdm1E9Q9Q2 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
R3hdm1E9Q9Q2 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
R3hdm1E9Q9Q2 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
R3hdm1E9Q9Q2 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
R3hdm1E9Q9Q2 Gm7901-201ENSMUST00000120430 1597 ntBASIC16.16■□□□□ 0.18
R3hdm1E9Q9Q2 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
R3hdm1E9Q9Q2 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
R3hdm1E9Q9Q2 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
R3hdm1E9Q9Q2 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
R3hdm1E9Q9Q2 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
R3hdm1E9Q9Q2 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
R3hdm1E9Q9Q2 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
R3hdm1E9Q9Q2 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC16.15■□□□□ 0.18
R3hdm1E9Q9Q2 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
R3hdm1E9Q9Q2 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
R3hdm1E9Q9Q2 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
R3hdm1E9Q9Q2 Gm12138-201ENSMUST00000122180 951 ntBASIC16.15■□□□□ 0.18
R3hdm1E9Q9Q2 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
R3hdm1E9Q9Q2 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC16.15■□□□□ 0.18
R3hdm1E9Q9Q2 Mir7085-201ENSMUST00000184353 66 ntBASIC16.15■□□□□ 0.18
R3hdm1E9Q9Q2 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC16.15■□□□□ 0.18
R3hdm1E9Q9Q2 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC16.15■□□□□ 0.18
R3hdm1E9Q9Q2 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
R3hdm1E9Q9Q2 Gm6180-201ENSMUST00000065243 498 ntBASIC16.15■□□□□ 0.18
R3hdm1E9Q9Q2 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
R3hdm1E9Q9Q2 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
R3hdm1E9Q9Q2 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
R3hdm1E9Q9Q2 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
R3hdm1E9Q9Q2 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
R3hdm1E9Q9Q2 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
R3hdm1E9Q9Q2 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
R3hdm1E9Q9Q2 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
R3hdm1E9Q9Q2 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
R3hdm1E9Q9Q2 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms