Protein–RNA interactions for Protein: E9Q414

Apob, Apolipoprotein B-100, mousemouse

Predictions only

Length 4,505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApobE9Q414 Efs-202ENSMUST00000227037 2540 ntBASIC8.77□□□□□ -1.01
ApobE9Q414 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC8.77□□□□□ -1.01
ApobE9Q414 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
ApobE9Q414 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
ApobE9Q414 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC8.77□□□□□ -1.01
ApobE9Q414 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
ApobE9Q414 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC8.77□□□□□ -1.01
ApobE9Q414 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC8.77□□□□□ -1.01
ApobE9Q414 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC8.77□□□□□ -1.01
ApobE9Q414 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
ApobE9Q414 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
ApobE9Q414 Gm38037-201ENSMUST00000192600 1624 ntBASIC8.77□□□□□ -1.01
ApobE9Q414 Gm10339-203ENSMUST00000225409 1671 ntBASIC8.77□□□□□ -1.01
ApobE9Q414 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
ApobE9Q414 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC8.77□□□□□ -1.01
ApobE9Q414 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC8.77□□□□□ -1.01
ApobE9Q414 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC8.77□□□□□ -1.01
ApobE9Q414 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC8.77□□□□□ -1.01
ApobE9Q414 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC8.77□□□□□ -1.01
ApobE9Q414 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
ApobE9Q414 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC8.77□□□□□ -1.01
ApobE9Q414 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC8.77□□□□□ -1.01
ApobE9Q414 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
ApobE9Q414 Gm43094-201ENSMUST00000196549 921 ntBASIC8.77□□□□□ -1.01
ApobE9Q414 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC8.77□□□□□ -1.01
ApobE9Q414 Snora73a-201ENSMUST00000082453 205 ntBASIC8.77□□□□□ -1.01
ApobE9Q414 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC8.77□□□□□ -1.01
ApobE9Q414 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
ApobE9Q414 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
ApobE9Q414 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC8.77□□□□□ -1.01
ApobE9Q414 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
ApobE9Q414 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC8.77□□□□□ -1.01
ApobE9Q414 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC8.77□□□□□ -1.01
ApobE9Q414 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
ApobE9Q414 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
ApobE9Q414 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC8.77□□□□□ -1.01
ApobE9Q414 Gm27572-201ENSMUST00000183702 255 ntBASIC8.77□□□□□ -1.01
ApobE9Q414 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
ApobE9Q414 Gm21038-201ENSMUST00000222205 1383 ntBASIC8.77□□□□□ -1.01
ApobE9Q414 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
ApobE9Q414 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
ApobE9Q414 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC8.76□□□□□ -1.01
ApobE9Q414 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC8.76□□□□□ -1.01
ApobE9Q414 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
ApobE9Q414 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
ApobE9Q414 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC8.76□□□□□ -1.01
ApobE9Q414 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC8.76□□□□□ -1.01
ApobE9Q414 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
ApobE9Q414 Gm9257-201ENSMUST00000221254 232 ntBASIC8.76□□□□□ -1.01
ApobE9Q414 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
ApobE9Q414 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC8.76□□□□□ -1.01
ApobE9Q414 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC8.76□□□□□ -1.01
ApobE9Q414 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC8.76□□□□□ -1.01
ApobE9Q414 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
ApobE9Q414 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC8.76□□□□□ -1.01
ApobE9Q414 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC8.76□□□□□ -1.01
ApobE9Q414 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
ApobE9Q414 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC8.76□□□□□ -1.01
ApobE9Q414 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
ApobE9Q414 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC8.76□□□□□ -1.01
ApobE9Q414 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC8.76□□□□□ -1.01
ApobE9Q414 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
ApobE9Q414 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC8.76□□□□□ -1.01
ApobE9Q414 Gm9182-201ENSMUST00000217829 639 ntBASIC8.76□□□□□ -1.01
ApobE9Q414 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
ApobE9Q414 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
ApobE9Q414 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
ApobE9Q414 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
ApobE9Q414 Gm37812-201ENSMUST00000195216 2475 ntBASIC8.76□□□□□ -1.01
ApobE9Q414 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC8.76□□□□□ -1.01
ApobE9Q414 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
ApobE9Q414 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
ApobE9Q414 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC8.76□□□□□ -1.01
ApobE9Q414 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
ApobE9Q414 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
ApobE9Q414 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
ApobE9Q414 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC8.76□□□□□ -1.01
ApobE9Q414 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
ApobE9Q414 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
ApobE9Q414 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC8.76□□□□□ -1.01
ApobE9Q414 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC8.76□□□□□ -1.01
ApobE9Q414 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
ApobE9Q414 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
ApobE9Q414 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
ApobE9Q414 Gm38230-201ENSMUST00000193572 1159 ntBASIC8.75□□□□□ -1.01
ApobE9Q414 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC8.75□□□□□ -1.01
ApobE9Q414 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
ApobE9Q414 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
ApobE9Q414 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
ApobE9Q414 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
ApobE9Q414 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
ApobE9Q414 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC8.75□□□□□ -1.01
ApobE9Q414 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
ApobE9Q414 Camk2g-217ENSMUST00000226630 1937 ntBASIC8.75□□□□□ -1.01
ApobE9Q414 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
ApobE9Q414 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
ApobE9Q414 Gm15393-201ENSMUST00000120499 219 ntBASIC8.75□□□□□ -1.01
ApobE9Q414 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC8.75□□□□□ -1.01
ApobE9Q414 Gm42442-201ENSMUST00000197951 1133 ntBASIC8.75□□□□□ -1.01
ApobE9Q414 Gm43118-201ENSMUST00000199149 775 ntBASIC8.75□□□□□ -1.01
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms