Protein–RNA interactions for Protein: B2RQC2

Usp42, Ubiquitin carboxyl-terminal hydrolase 42, mousemouse

Known RBP Predictions only

Length 1,324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp42B2RQC2 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.34
Usp42B2RQC2 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Usp42B2RQC2 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Usp42B2RQC2 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Usp42B2RQC2 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Usp42B2RQC2 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Usp42B2RQC2 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC17.14■□□□□ 0.33
Usp42B2RQC2 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC17.14■□□□□ 0.33
Usp42B2RQC2 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Usp42B2RQC2 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Usp42B2RQC2 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Usp42B2RQC2 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Usp42B2RQC2 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Usp42B2RQC2 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Usp42B2RQC2 Gm25287-201ENSMUST00000103846 110 ntBASIC17.14■□□□□ 0.33
Usp42B2RQC2 Gm22918-201ENSMUST00000103855 110 ntBASIC17.14■□□□□ 0.33
Usp42B2RQC2 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC17.14■□□□□ 0.33
Usp42B2RQC2 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
Usp42B2RQC2 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC17.14■□□□□ 0.33
Usp42B2RQC2 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC17.14■□□□□ 0.33
Usp42B2RQC2 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC17.14■□□□□ 0.33
Usp42B2RQC2 Gm38225-201ENSMUST00000194001 393 ntBASIC17.14■□□□□ 0.33
Usp42B2RQC2 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC17.14■□□□□ 0.33
Usp42B2RQC2 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC17.14■□□□□ 0.33
Usp42B2RQC2 AC131710.1-201ENSMUST00000228336 990 ntBASIC17.14■□□□□ 0.33
Usp42B2RQC2 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Usp42B2RQC2 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Usp42B2RQC2 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC17.14■□□□□ 0.33
Usp42B2RQC2 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC17.14■□□□□ 0.33
Usp42B2RQC2 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC17.14■□□□□ 0.33
Usp42B2RQC2 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC17.14■□□□□ 0.33
Usp42B2RQC2 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Usp42B2RQC2 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Usp42B2RQC2 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
Usp42B2RQC2 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Usp42B2RQC2 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Usp42B2RQC2 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Usp42B2RQC2 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Usp42B2RQC2 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Usp42B2RQC2 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Usp42B2RQC2 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC17.13■□□□□ 0.33
Usp42B2RQC2 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Usp42B2RQC2 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Usp42B2RQC2 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Usp42B2RQC2 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Usp42B2RQC2 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Usp42B2RQC2 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Usp42B2RQC2 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
Usp42B2RQC2 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Usp42B2RQC2 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Usp42B2RQC2 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Usp42B2RQC2 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Usp42B2RQC2 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Usp42B2RQC2 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Usp42B2RQC2 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Usp42B2RQC2 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC17.12■□□□□ 0.33
Usp42B2RQC2 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Usp42B2RQC2 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Usp42B2RQC2 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Usp42B2RQC2 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
Usp42B2RQC2 Gm14042-201ENSMUST00000120139 833 ntBASIC17.12■□□□□ 0.33
Usp42B2RQC2 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC17.12■□□□□ 0.33
Usp42B2RQC2 Ighv8-7-201ENSMUST00000194349 297 ntBASIC17.12■□□□□ 0.33
Usp42B2RQC2 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Usp42B2RQC2 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Usp42B2RQC2 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Usp42B2RQC2 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Usp42B2RQC2 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
Usp42B2RQC2 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Usp42B2RQC2 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Usp42B2RQC2 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Usp42B2RQC2 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC17.12■□□□□ 0.33
Usp42B2RQC2 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Usp42B2RQC2 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Usp42B2RQC2 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Usp42B2RQC2 Gm42466-201ENSMUST00000202099 1301 ntBASIC17.11■□□□□ 0.33
Usp42B2RQC2 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC17.11■□□□□ 0.33
Usp42B2RQC2 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Usp42B2RQC2 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Usp42B2RQC2 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Usp42B2RQC2 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC17.11■□□□□ 0.33
Usp42B2RQC2 AC158529.1-201ENSMUST00000223618 239 ntBASIC17.11■□□□□ 0.33
Usp42B2RQC2 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Usp42B2RQC2 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Usp42B2RQC2 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC17.11■□□□□ 0.33
Usp42B2RQC2 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Usp42B2RQC2 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Usp42B2RQC2 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Usp42B2RQC2 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC17.1■□□□□ 0.33
Usp42B2RQC2 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Usp42B2RQC2 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Usp42B2RQC2 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Usp42B2RQC2 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Usp42B2RQC2 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Usp42B2RQC2 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC17.1■□□□□ 0.33
Usp42B2RQC2 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Usp42B2RQC2 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Usp42B2RQC2 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Usp42B2RQC2 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Usp42B2RQC2 Gm22065-201ENSMUST00000103753 110 ntBASIC17.1■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms