Protein–RNA interactions for Protein: A7VMS2

Gm11127, MHC classIb T15, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm11127A7VMS2 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Gm11127A7VMS2 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Gm11127A7VMS2 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Gm11127A7VMS2 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Gm11127A7VMS2 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Gm11127A7VMS2 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Gm11127A7VMS2 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Gm11127A7VMS2 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Gm11127A7VMS2 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC13.02□□□□□ -0.32
Gm11127A7VMS2 Gm6198-201ENSMUST00000191337 2929 ntBASIC13.02□□□□□ -0.32
Gm11127A7VMS2 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Gm11127A7VMS2 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Gm11127A7VMS2 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC13.02□□□□□ -0.32
Gm11127A7VMS2 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Gm11127A7VMS2 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Gm11127A7VMS2 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC13.02□□□□□ -0.32
Gm11127A7VMS2 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Gm11127A7VMS2 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Gm11127A7VMS2 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Gm11127A7VMS2 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Gm11127A7VMS2 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Gm11127A7VMS2 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Gm11127A7VMS2 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Gm11127A7VMS2 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Gm11127A7VMS2 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Gm11127A7VMS2 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Gm11127A7VMS2 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Gm11127A7VMS2 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Gm11127A7VMS2 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC13.02□□□□□ -0.33
Gm11127A7VMS2 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Gm11127A7VMS2 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Gm11127A7VMS2 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Gm11127A7VMS2 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Gm11127A7VMS2 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Gm11127A7VMS2 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Gm11127A7VMS2 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Gm11127A7VMS2 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Gm11127A7VMS2 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Gm11127A7VMS2 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Gm11127A7VMS2 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Gm11127A7VMS2 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Gm11127A7VMS2 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Gm11127A7VMS2 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Gm11127A7VMS2 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Gm11127A7VMS2 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
Gm11127A7VMS2 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Gm11127A7VMS2 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Gm11127A7VMS2 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Gm11127A7VMS2 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Gm11127A7VMS2 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Gm11127A7VMS2 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Gm11127A7VMS2 Kcnk16-202ENSMUST00000225596 2127 ntBASIC13.01□□□□□ -0.33
Gm11127A7VMS2 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Gm11127A7VMS2 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Gm11127A7VMS2 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Gm11127A7VMS2 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Gm11127A7VMS2 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Gm11127A7VMS2 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Gm11127A7VMS2 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Gm11127A7VMS2 Gm15372-201ENSMUST00000120729 834 ntBASIC13.01□□□□□ -0.33
Gm11127A7VMS2 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC13.01□□□□□ -0.33
Gm11127A7VMS2 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC13.01□□□□□ -0.33
Gm11127A7VMS2 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Gm11127A7VMS2 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC13.01□□□□□ -0.33
Gm11127A7VMS2 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC13.01□□□□□ -0.33
Gm11127A7VMS2 Gm8655-201ENSMUST00000221159 852 ntBASIC13.01□□□□□ -0.33
Gm11127A7VMS2 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Gm11127A7VMS2 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Gm11127A7VMS2 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Gm11127A7VMS2 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Gm11127A7VMS2 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Gm11127A7VMS2 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Gm11127A7VMS2 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Gm11127A7VMS2 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Gm11127A7VMS2 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Gm11127A7VMS2 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Gm11127A7VMS2 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Gm11127A7VMS2 Gm43570-201ENSMUST00000199951 3688 ntBASIC13.01□□□□□ -0.33
Gm11127A7VMS2 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Gm11127A7VMS2 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
Gm11127A7VMS2 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Gm11127A7VMS2 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Gm11127A7VMS2 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Gm11127A7VMS2 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Gm11127A7VMS2 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Gm11127A7VMS2 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Gm11127A7VMS2 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Gm11127A7VMS2 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC13□□□□□ -0.33
Gm11127A7VMS2 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC13□□□□□ -0.33
Gm11127A7VMS2 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC13□□□□□ -0.33
Gm11127A7VMS2 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC13□□□□□ -0.33
Gm11127A7VMS2 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Gm11127A7VMS2 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Gm11127A7VMS2 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC13□□□□□ -0.33
Gm11127A7VMS2 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Gm11127A7VMS2 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
Gm11127A7VMS2 Gm8344-201ENSMUST00000119813 856 ntBASIC13□□□□□ -0.33
Gm11127A7VMS2 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC13□□□□□ -0.33
Gm11127A7VMS2 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC13□□□□□ -0.33
Gm11127A7VMS2 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms