Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Chd6A3KFM7 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Chd6A3KFM7 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC11.77□□□□□ -0.53
Chd6A3KFM7 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Chd6A3KFM7 Gm20426-201ENSMUST00000173657 440 ntBASIC11.77□□□□□ -0.53
Chd6A3KFM7 Gm28727-201ENSMUST00000176549 443 ntTSL 3 BASIC11.77□□□□□ -0.53
Chd6A3KFM7 Gm8546-201ENSMUST00000178288 1264 ntBASIC11.77□□□□□ -0.53
Chd6A3KFM7 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Chd6A3KFM7 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC11.77□□□□□ -0.53
Chd6A3KFM7 Gm6621-201ENSMUST00000193251 772 ntBASIC11.77□□□□□ -0.53
Chd6A3KFM7 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Chd6A3KFM7 AC153974.2-201ENSMUST00000218577 1025 ntBASIC11.77□□□□□ -0.53
Chd6A3KFM7 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Chd6A3KFM7 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC11.77□□□□□ -0.53
Chd6A3KFM7 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Chd6A3KFM7 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Chd6A3KFM7 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Chd6A3KFM7 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Chd6A3KFM7 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Chd6A3KFM7 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Chd6A3KFM7 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Chd6A3KFM7 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Chd6A3KFM7 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Chd6A3KFM7 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Chd6A3KFM7 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Chd6A3KFM7 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC11.76□□□□□ -0.53
Chd6A3KFM7 Gm4971-201ENSMUST00000205991 1108 ntBASIC11.76□□□□□ -0.53
Chd6A3KFM7 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC11.76□□□□□ -0.53
Chd6A3KFM7 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Chd6A3KFM7 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Chd6A3KFM7 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC11.76□□□□□ -0.53
Chd6A3KFM7 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Chd6A3KFM7 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Chd6A3KFM7 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Chd6A3KFM7 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Chd6A3KFM7 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Chd6A3KFM7 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Chd6A3KFM7 Gm38327-201ENSMUST00000195852 1755 ntBASIC11.76□□□□□ -0.53
Chd6A3KFM7 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Chd6A3KFM7 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Chd6A3KFM7 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Chd6A3KFM7 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC11.76□□□□□ -0.53
Chd6A3KFM7 Gm12241-201ENSMUST00000118330 726 ntBASIC11.76□□□□□ -0.53
Chd6A3KFM7 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC11.76□□□□□ -0.53
Chd6A3KFM7 Gm22331-201ENSMUST00000158066 136 ntBASIC11.76□□□□□ -0.53
Chd6A3KFM7 Mir1943-201ENSMUST00000158276 73 ntBASIC11.76□□□□□ -0.53
Chd6A3KFM7 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Chd6A3KFM7 Gm45186-201ENSMUST00000206874 478 ntBASIC11.76□□□□□ -0.53
Chd6A3KFM7 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Chd6A3KFM7 Gm12846-201ENSMUST00000120431 1373 ntBASIC11.76□□□□□ -0.53
Chd6A3KFM7 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Chd6A3KFM7 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Chd6A3KFM7 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Chd6A3KFM7 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Chd6A3KFM7 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Chd6A3KFM7 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Chd6A3KFM7 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Chd6A3KFM7 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC11.76□□□□□ -0.53
Chd6A3KFM7 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC11.76□□□□□ -0.53
Chd6A3KFM7 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Chd6A3KFM7 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Chd6A3KFM7 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Chd6A3KFM7 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Chd6A3KFM7 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Chd6A3KFM7 Gm13010-201ENSMUST00000140495 828 ntTSL 5 BASIC11.75□□□□□ -0.53
Chd6A3KFM7 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC11.75□□□□□ -0.53
Chd6A3KFM7 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Chd6A3KFM7 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Chd6A3KFM7 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Chd6A3KFM7 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Chd6A3KFM7 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Chd6A3KFM7 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Chd6A3KFM7 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Chd6A3KFM7 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Chd6A3KFM7 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Chd6A3KFM7 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Chd6A3KFM7 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Chd6A3KFM7 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Chd6A3KFM7 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Chd6A3KFM7 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Chd6A3KFM7 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Chd6A3KFM7 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC11.75□□□□□ -0.53
Chd6A3KFM7 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC11.75□□□□□ -0.53
Chd6A3KFM7 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC11.75□□□□□ -0.53
Chd6A3KFM7 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Chd6A3KFM7 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Chd6A3KFM7 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC11.75□□□□□ -0.53
Chd6A3KFM7 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Chd6A3KFM7 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
Chd6A3KFM7 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Chd6A3KFM7 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Chd6A3KFM7 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC11.75□□□□□ -0.53
Chd6A3KFM7 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Chd6A3KFM7 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC11.75□□□□□ -0.53
Chd6A3KFM7 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC11.75□□□□□ -0.53
Chd6A3KFM7 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC11.75□□□□□ -0.53
Chd6A3KFM7 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Chd6A3KFM7 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Chd6A3KFM7 Gm44729-201ENSMUST00000206759 2052 ntBASIC11.74□□□□□ -0.53
Chd6A3KFM7 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 60.8 ms