Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Gm14767-201ENSMUST00000121559 586 ntBASIC15.31■□□□□ 0.04
Scn1aA2APX8 Gm23547-201ENSMUST00000158210 271 ntBASIC15.31■□□□□ 0.04
Scn1aA2APX8 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Scn1aA2APX8 Gm43598-201ENSMUST00000202482 2479 ntBASIC15.31■□□□□ 0.04
Scn1aA2APX8 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Scn1aA2APX8 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Scn1aA2APX8 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Scn1aA2APX8 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Scn1aA2APX8 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Scn1aA2APX8 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Scn1aA2APX8 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Scn1aA2APX8 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Scn1aA2APX8 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Scn1aA2APX8 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Scn1aA2APX8 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Scn1aA2APX8 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Scn1aA2APX8 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Scn1aA2APX8 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Scn1aA2APX8 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Scn1aA2APX8 Gm12151-201ENSMUST00000121374 290 ntBASIC15.3■□□□□ 0.04
Scn1aA2APX8 Gm14719-201ENSMUST00000121891 340 ntBASIC15.3■□□□□ 0.04
Scn1aA2APX8 Gm16476-201ENSMUST00000221544 139 ntBASIC15.3■□□□□ 0.04
Scn1aA2APX8 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Scn1aA2APX8 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Scn1aA2APX8 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Scn1aA2APX8 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Scn1aA2APX8 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Scn1aA2APX8 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Scn1aA2APX8 Gm9856-201ENSMUST00000217077 2578 ntBASIC15.3■□□□□ 0.04
Scn1aA2APX8 Gm13127-201ENSMUST00000118978 1389 ntBASIC15.3■□□□□ 0.04
Scn1aA2APX8 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Scn1aA2APX8 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
Scn1aA2APX8 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Scn1aA2APX8 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Scn1aA2APX8 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Scn1aA2APX8 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Scn1aA2APX8 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Scn1aA2APX8 Gm15653-201ENSMUST00000119247 907 ntBASIC15.29■□□□□ 0.04
Scn1aA2APX8 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Scn1aA2APX8 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Scn1aA2APX8 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Scn1aA2APX8 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Scn1aA2APX8 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Scn1aA2APX8 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Scn1aA2APX8 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Scn1aA2APX8 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Scn1aA2APX8 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Scn1aA2APX8 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Scn1aA2APX8 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Scn1aA2APX8 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Scn1aA2APX8 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Scn1aA2APX8 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Scn1aA2APX8 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
Scn1aA2APX8 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
Scn1aA2APX8 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Scn1aA2APX8 Mir7684-201ENSMUST00000183858 60 ntBASIC15.29■□□□□ 0.04
Scn1aA2APX8 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC15.29■□□□□ 0.04
Scn1aA2APX8 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Scn1aA2APX8 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Scn1aA2APX8 Gm5763-201ENSMUST00000155951 1530 ntBASIC15.29■□□□□ 0.04
Scn1aA2APX8 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Scn1aA2APX8 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC15.29■□□□□ 0.04
Scn1aA2APX8 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Scn1aA2APX8 Sybu-209ENSMUST00000228639 4113 ntBASIC15.28■□□□□ 0.04
Scn1aA2APX8 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Scn1aA2APX8 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Scn1aA2APX8 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Scn1aA2APX8 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Scn1aA2APX8 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Scn1aA2APX8 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Scn1aA2APX8 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Scn1aA2APX8 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC15.28■□□□□ 0.04
Scn1aA2APX8 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Scn1aA2APX8 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC15.28■□□□□ 0.04
Scn1aA2APX8 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Scn1aA2APX8 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Scn1aA2APX8 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC15.28■□□□□ 0.04
Scn1aA2APX8 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC15.28■□□□□ 0.04
Scn1aA2APX8 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC15.28■□□□□ 0.04
Scn1aA2APX8 Gm5626-201ENSMUST00000222151 1058 ntBASIC15.28■□□□□ 0.04
Scn1aA2APX8 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC15.28■□□□□ 0.04
Scn1aA2APX8 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Scn1aA2APX8 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC15.28■□□□□ 0.04
Scn1aA2APX8 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC15.28■□□□□ 0.04
Scn1aA2APX8 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Scn1aA2APX8 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Scn1aA2APX8 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Scn1aA2APX8 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Scn1aA2APX8 Gm43509-201ENSMUST00000196551 2594 ntBASIC15.28■□□□□ 0.04
Scn1aA2APX8 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Scn1aA2APX8 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Scn1aA2APX8 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Scn1aA2APX8 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
Scn1aA2APX8 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Scn1aA2APX8 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Scn1aA2APX8 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Scn1aA2APX8 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Scn1aA2APX8 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC15.27■□□□□ 0.04
Scn1aA2APX8 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC15.27■□□□□ 0.04
Scn1aA2APX8 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC15.27■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms